O54328/158-544 KVVGSYF-VEWG------------------VYGRN--------FTVDKIPAQN------- CONSENSUS/80% hhhhsYh.stht..................................tph..t........ CONSENSUS/65% hplssYa.ssau....................t..........h..pplshph....... CONSENSUS/50% t+lluYa.ssWu..t.................G..........a.lsclssst....... O54328/158-544 ------------LTHLLYGFIPICG-GNGINDSLK---EIEGSFQALQRS-----CQGRE CONSENSUS/80% ............hoal.auFh.hp...s................................ CONSENSUS/65% ............hTHlhauFssls..tsh..phh.......................... CONSENSUS/50% ............lTHllYuFusls..sssthpht.......................... O54328/158-544 DFKVSIHDPFAALQKA---QKGVTAWDDP---YK-----GNFGQ--LMALKQAR--PDLK CONSENSUS/80% ..............................................h.thtt.....th+ CONSENSUS/65% ....s...................................ph....hhth+pp..tsplK CONSENSUS/50% s..ssh.................................tphtp..lppLKpp..ssslK O54328/158-544 ILP--SIGGWTL-------------SDPFFFMGD-K-------VKRDRFVGS---VKEFL CONSENSUS/80% hhh..ulGG.t...............t.a..hhtp........tt+p.Fhpo...hthh. CONSENSUS/65% hhl..SlGGas...............s.Ftphsss........tpRppFlpS..hlphhp CONSENSUS/50% lll..SIGGWsh..............ssFsshssst.......ssRcsFlcS..slsFl+ O54328/158-544 QT---------------WKFFDGVDID-WEFPGGKGANPNLG--------SPQDGE---T CONSENSUS/80% pht.................hDGlDlt.WcaP......................t..... CONSENSUS/65% phs.................FDGlDlD.WEaPss..................tppp...s CONSENSUS/50% cas.................FDGlDlD.WEYPusts.s..............pccp...s O54328/158-544 YVLLMK-ELRA-MLD----QLSAETGRKYELTSAISAGKDKI--DKVAY----------- CONSENSUS/80% ah.hhp.ph+t.h.t............th.lohshss....h..t............... CONSENSUS/65% astLlp.-l+pthpt..........tpphhLohAlsss..th..tts............. CONSENSUS/50% astLlc.ELRpthsp.....ht.tttcpalLTsAlsuutspl..pps............. O54328/158-544 --------NVAQNSMDHIFLMSYDFYG---AFDLK--------NLGHQTALNAPAWKP-- CONSENSUS/80% .......h.th.p.hDhl.lhsaDhhu. ..htt..........ss..sslh........ CONSENSUS/65% ......phtphsphlDalslMoYDatG. .sWss..........sGhpusLassst.... CONSENSUS/50% .....h-lsplsphlDaINlMoYDaaG. .uWss.........hoGasuPLYssssts.. O54328/158-544 -----------------------------------------------------------D CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ O54328/158-544 TAYTTVNGVNA---------------------LLA------------------------- CONSENSUS/80% ..hssp.shph.....................hh.......................... CONSENSUS/65% ..hssc.ulph.....................ah.......................... CONSENSUS/50% tthNs-tulch.....................als......................... O54328/158-544 QG--VKPG---KIVVGTAMYGRGWTGVNGYQNN--------------------------- CONSENSUS/80% .s..h.sp...Kl.hGhshYup.ap.st................................ CONSENSUS/65% tu..hssp...KlllGhshYGRsaphspss.t............................ CONSENSUS/50% pG..sPss...KlllGlPhYGRuWssssssps..ht........................ O54328/158-544 --------IPFTG-------------TATG--PVKGTW--------------ENGIVDYR CONSENSUS/80% ........t.h.t..............s........t...............tss.htah CONSENSUS/65% ........s.h.s.............suss...h.hsh..............psGhhsap CONSENSUS/50% ........sshsG.............suss...sptTh..............csGslsYc O54328/158-544 QIAS--QFMSGE---------------------------WQYTYDAT-AEAPYVFKP--- CONSENSUS/80% tl.t.....t.............................hth.hp...t.ssahhp.... CONSENSUS/65% plsp...htt.............................hphtacpt.stssahap.... CONSENSUS/50% clsp..hhpstt...........................hshsaDss.spusYsas.... O54328/158-544 ---STG---DLITFDDARSVQAKGKYVLDKQLGGLFS----WEIDAD CONSENSUS/80% ...tp.....hhsa-s.tsht.Khtahhp.tluGhhh....WthshD CONSENSUS/65% ...ss....phlsa-s.pSlttKspalpppsLGGhhh....WplshD CONSENSUS/50% ...ss....paloYDsscSlpsKspYl+scsLGGlhh....Wsl-sD
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |