INV3_DAUCA/58- HFQPQKHWINDPNGPMFY--KGYYHLFYQYNPKGS---VW--GNIVWAHSVS----KDLI CONSENSUS/80% HhpP.pshhNDPNG.hhh..pGhYHlFYQapP.ss....h....hhWuHssS....pDhl CONSENSUS/65% HapP.psWhNDPNG.haa..pGhYHLFYQaNPtus...has...hhWuHusS....pDLl CONSENSUS/50% HFpPscsWMNDPNGslYa..cGhYHLFYQYNPpus...hWu...lsWGHuVS....cDLl INV3_DAUCA/58- NWI---ALEPAIFPSK---PFDQYG----CWSGSATILPGN-KPVILYTG---------- CONSENSUS/80% pW....t...AhhPpt.....c.tG....saoGSss...st....hhaou.......... CONSENSUS/65% pWp...phshAlhPsp.....D.pG....saSGSAsh.sss..hshhYTG.......... CONSENSUS/50% cWp...cLslAlsPcc....aDpsG....saSGSAslhsss..ssllYTG.......... INV3_DAUCA/58- ----IVSPDPE-------------NAQVQNYAVPANYSDPFLREWVKPD-NNPLVGV--H CONSENSUS/80% ....ht..t...................tt.t..h.hs.s.hhpa.K....sslh..... CONSENSUS/65% ....ls..s...................pp.sh.hshosshhhpahK....NPlls...s CONSENSUS/50% ....lss.st................psQstuhssshScstttcWpKas..NPVlss..s INV3_DAUCA/58- T----------ENPSAFRDPTTA--WFDG------GH-WKMLVG-SSRKH----RGIAYL CONSENSUS/80% s.............tpFRDPpsh..h.t........p.Whhhlu.tp..........hhh CONSENSUS/65% st...........sppFRDPpsh..Whtt.......p.WhhllG.up.t......Ghshl CONSENSUS/50% ss..........ssscFRDPplh..Wpss...s..tc.WphllGtuccsp....pGhsll INV3_DAUCA/58- YRSK------------DFK-KWKRS-PHPIHT----KAETG--------MWECPDFYPVS CONSENSUS/80% Ypo.............shh.paph.....ht........hu........haECsshh.ls CONSENSUS/65% YpSp............Dhh.pWphh.tthhts.....ttsG........MWECPDha.ls CONSENSUS/50% YcSc............Dhp.cWsht.sphlps....hsssG........MWECPDhaPVs INV3_DAUCA/58- PRS---------EDGLDNSK-----MGRG------------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% ht..............t........................................... CONSENSUS/50% sps...........t.-sp......................................... INV3_DAUCA/58- ----IKHVLKVSLNST-------------------------------------------- CONSENSUS/80% ......hVhhhs.p.............................................. CONSENSUS/65% .....paVLhhShs.............................................. CONSENSUS/50% .....+aVLtsShs.............................................. INV3_DAUCA/58- ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ INV3_DAUCA/58- ---RYEYYTIGRYNRVR-------DFYVPD------------------------------ CONSENSUS/80% .....phY.hG.hs...........ta.s............................... CONSENSUS/65% ...ptshYhlGpass..........passt.............................. CONSENSUS/50% ...ppshYslGsaDu.t.......spasPD.............................. INV3_DAUCA/58- -NTSV------------------------------------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% .ss......................................................... CONSENSUS/50% .ssp........................................................ INV3_DAUCA/58- -----DGWAG-------------------------------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% ......htht.................................................. CONSENSUS/50% ......sshu.................................................. INV3_DAUCA/58- ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ INV3_DAUCA/58- ---------LRYDYG-NFYASK--TFYDP--------IKKRRILWGWANESDSQ-IDDVQ CONSENSUS/80% ...........hDhG.paYAsp..oa.s..........t.ctlhhuWhs..p...ttph. CONSENSUS/65% ..........phDaG.caYAsp..oFhs.........sttRRlhhuWhspss...tsshs CONSENSUS/50% .........hclDaG.-FYAop..TFaDs........scpRRlllGWhupsDt..ss-ls INV3_DAUCA/58- -----KGWAGIQLIPRRIWLD---------PSGRQ---------LVQWPIEEVEGLRG-- CONSENSUS/80% .....psWtsh.shsRpl..............ttp.........lhphPl.phptLp... CONSENSUS/65% .....cGWsuh.olPRplhh...........sspp.........LhQhPlpElcpLR... CONSENSUS/50% .....+GWuustolPRcltLs.........psssp.........LlQhPVcEl-sLR... INV3_DAUCA/58- ---------SELHMR-NQKLDMGVHVEVTGITAA-QA-DVDATFSFKS----LDKAESFD CONSENSUS/80% .................h.ht..............p..-l.hpht.t............. CONSENSUS/65% ...........ht.h.shthp.sphhth.sht.ssph.-lphpaphs............. CONSENSUS/50% ...........spptpshslcsushhpltslssuspshDl-lsFpls............. INV3_DAUCA/58- PE----W---------------INLDAQ-DVCDSMGSTI-QGGLGPFGLLTLAS--KDLE CONSENSUS/80% ..............................................hslhhht....... CONSENSUS/65% ..................................ptss......s.hGlhhhs......p CONSENSUS/50% ..................................ssss...shhusFGLhlhus..tphp INV3_DAUCA/58- EYTPVFFRIFKAEDQ--------KLKVLMCSDAKRSS--------LAEGLYKPSFRGFVD CONSENSUS/80% t.h.lhh.h.p.................hh.-p..pt..........t...h..hts... CONSENSUS/65% ptsslhaphtp...............shhshDc.tss........h.s.hhtthhss..s CONSENSUS/50% EpTslaacstc...............sthslD+.pSS........spcpshpsstuuhls INV3_DAUCA/58- VDLS-DKK-------ISLRSLIDNSVVESFGAQR CONSENSUS/80% h.....t........hphphhlDpu.lE.FhttG CONSENSUS/65% l..t..p........hpl+hllDpSlVEsFsssG CONSENSUS/50% lsss..c........loLRlLlD+SlVEsFussG
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |