232721.Ajs_2680_from_4_to_142VRV-AVNGYGVIGKRVADAVA---------------LQ--EDMALAGVAD--------VV CONSENSUS/80% hcl.ulNGaG+IG+.hh+hhh................t...phpllslsc........hs CONSENSUS/65% h+l.uINGFGRIGRhlhRshh...............tp..splclVulND.......hss CONSENSUS/50% l+V.uINGFGRIGRhVhRAhh...............tp..sclElVAIND.......hsD 232721.Ajs_2680_from_4_to_142-HDYRLQ---VAA--QR-----GFAIH------------------------------AA- CONSENSUS/80% ..phhsa...hhp.aDo.....saGhh...............................t. CONSENSUS/65% .hphhAa...lhc.aDS.....sHGpa..............................tu. CONSENSUS/50% .scthAa...LL+.YDS.....sHG+F..............................su. 232721.Ajs_2680_from_4_to_142-----TFE---AEGA-----MR---AAGL-----AL-----AGNLA-------ELLA-KA CONSENSUS/80% .....plp............hp...ttth.....hl.....ssp.h.......thht.tt CONSENSUS/65% .....plp............hc...sstl.....hl.....sGp.l.......plht.pp CONSENSUS/50% .....sVc............s-...sssl.....ll.....sG+pI.......clhs.-+ 232721.Ajs_2680_from_4_to_142------------------D--VVVDCTPKKV---AAVN-KE-V-----YAAA----GV-- CONSENSUS/80% p..ttl.a.t...t...h-..hll-s.oGha...tsht.thth.....alpt....Gs.. CONSENSUS/65% s.PtplsW.t.phs...s-..lVlEs.TGhF...sstc.putt.....Hlpu....GA.. CONSENSUS/50% D.PsplsW.s.chG...lD..lVlEu.TGhF...soc-.cAps.....HLcu....GA.. 232721.Ajs_2680_from_4_to_142KSIFH---GG-ESHALTGH--------SFVA-QANYASAIGRE-----STR---VVSC CONSENSUS/80% c+Vll...ou.Psts.............hVh.GlNpp.hpst......llo...suSC CONSENSUS/65% K+Vll...oA.Pupsss..........shVh.GVNccphssppp....llS...sASC CONSENSUS/50% KKVlI...SA.Pucsss..........olVh.GVNccpacsscc....IlS...NASC
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |