329726.AM1_3739_from_528_to_677/1-150GKTVRVPVEQLEQFNTLFGKLILDRN----------------------TVNLRF------ CONSENSUS/80% tpslRVshpplDplhshsGELllsps.......................l.t..tt.t.. CONSENSUS/65% ppolRVssc+LDpLhsllGELVlsps......................pltphsppht.. CONSENSUS/50% spolRVcl-+LDpLlNLVGELVIs+u......................pLpphspphss. 329726.AM1_3739_from_528_to_677/1-150------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 329726.AM1_3739_from_528_to_677/1-150----EQLQAYTQLIRQRIRQLEASNTQLQQWYDR------ASMEGI---------VPAEE CONSENSUS/80% ....tth.p.httl.............................................. CONSENSUS/65% ....pplppshppl.............................................. CONSENSUS/50% ....pcLpcslppL.............................................. 329726.AM1_3739_from_528_to_677/1-150AA---PAQPEQLAEP--RSG--QF-DALEMDQ---YTDLHLIAQDQIETIVQLQEVGSDI CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 329726.AM1_3739_from_528_to_677/1-150ELTLQDM-GQAVRDINQTTRSL CONSENSUS/80% ........tthspplppthhph CONSENSUS/65% ........pclsp-LQ-slhph CONSENSUS/50% ........sRlss-LQ-ulMpl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |