H2AV_DROME/1-1 AGKDSGKA-KAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTA CONSENSUS/80% .ttt.tth.tttt.ppS.+AGLtFPVGRltphL+ptphup.RlGssusVYhAAlLEYLsA CONSENSUS/65% spsstttttpppssopSt+AGLpFPVGRltRhL+cGpYAc.RlGuuAsVYLAAVLEYLoA CONSENSUS/50% u+uusuctscpcusS+Ss+AGLQFPVGRIcRaL++GpYAc.RVGAGAPVYLAAVLEYLTA H2AV_DROME/1-1 EVLELAGNASKDL---------------KVKRITPRHLQLAIRG-----DEELDSLIKA- CONSENSUS/80% ElLELuspAupp................KhpRlhPRpl.LAlps.....D--LspLhts. CONSENSUS/65% ElLELAGNAA+Ds...............K+pRIsPRHlpLAlRs.....DEELspLlts. CONSENSUS/50% ElLELAGNAA+Ds...............KKsRIoPRHlpLAlRN.....DEELsKLLsu. H2AV_DROME/1-1 ---TIAGGGVIP-HIHKSLIGKKEET CONSENSUS/80% ..sTlupGGVhP..Ip..Lh.+ptt. CONSENSUS/65% ..VTIApGGVlP.sIptsLLsKKstp CONSENSUS/50% ..VTIAsGGVLP.NIpssLLPKKssc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |