246196.MSMEG_1756_from_118_to_LGPDLL---------------------GPDWE---------------------------- CONSENSUS/80% lGs-sht......................ths............................ CONSENSUS/65% LGP-PLs......................tas.t.......................... CONSENSUS/50% LGPEPLs.....................ssFssph......................... 246196.MSMEG_1756_from_118_to_----PRVAADNLAADPDRP----------------LAQALLDQ-RVMAGVGNVYCN---- CONSENSUS/80% .......hhthhttppt..................lpthLhDp.phlsGlGNlYss.... CONSENSUS/65% .......hhptlptcpp..................lKshLlDQ.plluGlGNIYss.... CONSENSUS/50% .......ltcpLcs++ss.................IKssLLDQ.slVAGlGNIYAs.... 246196.MSMEG_1756_from_118_to_--------------ELCFVFGRLPTAPVGTLKD--------PLRVVQRARDMLWL----- CONSENSUS/80% ..............EhLahutlpP.p.stpls.........httlhtthhthhtt..ult CONSENSUS/65% ..............EsLatutlpPtp.usplstt.......hppLhpslpplLpt..ult CONSENSUS/50% ..............EuLFpAuI+Pp+sAssLocs......plccLhssl+cVLpc..Alc 246196.MSMEG_1756_from_118_to_NRSRWNRTTT CONSENSUS/80% ttssshpt.h CONSENSUS/65% tGGoohpshh CONSENSUS/50% sGGool+cat
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |