Consensus terms for the HABP4_PAI-RBP1 domain

3694.estExt_fgenesh4_pm.C_290040_from_160_to_275PRRQYDRHS-GTGRG--------------NELKR--EGSGRGNWGTPADEIAPE------
CONSENSUS/80%    .p+ta-RpS.sss+s.................++..tstu.tsWGs.tt...........
CONSENSUS/65%    s+Rpa-R+S.Gos+s...............ttK+..tGuGttNWGssppp..........
CONSENSUS/50%    u+R-FDR+S.Gos+o..............sp-KR..sGuGspNWGosp--h.........


3694.estExt_fgenesh4_pm.C_290040_from_160_to_275----------TEEPVVDNEKSVITEKQPEEEdaaaasKDAADASKDAAV-------NEPE
CONSENSUS/80%    ...................t..................tt.p.tttt..........t.t
CONSENSUS/65%    ..........pt.p.stsppts..t.........tttttssptsppsts.......tc.p
CONSENSUS/50%    ..........pppspsssccsstsp.........pssssss-ssp-sss.......pEs-


3694.estExt_fgenesh4_pm.C_290040_from_160_to_275EK------EPEDKEMTLEE-YEKVLEEK----------RKAL--LSL-KAEER--KVG
CONSENSUS/80%    ............tphoL-E.a.t..tpt..........+.t....th.phcc...t.t
CONSENSUS/65%    pp........pspphTL-E.acshpppp..........+.t....th.plccs..pps
CONSENSUS/50%    -c........Es+EMTLDE.a+AlQcpp..........Rsc...ssh.slR+s..css

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T