O58222/1-144 KLGDALVHLLRNAVDHGIEPPEERVKL---------------GKPRAGRVELIAKREK-- CONSENSUS/80% ht...l.phl.phltNuhchs.t........ .............ltltht..... CONSENSUS/65% sstttltpllhNllsNAlchs.t........ ..........tsplplphpttt.. CONSENSUS/50% sDsspLppllpNLlsNAl+asss........ ..........suplplslppps.. O58222/1-144 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ O58222/1-144 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ O58222/1-144 --------------NHVVIIVRDDGRGIDPEKVKRKAVERGLITPEEAANLSDEEAINLI CONSENSUS/80% ................h.ltltDsG.Gls.........................t....h CONSENSUS/65% ..............tthhlplpDsGhGls.........................p.htpl CONSENSUS/50% ..............splplsVpDsGsGIss........................-phspl O58222/1-144 FLPGFSTAD-------------------------KVTDVSG--RGVGMDVVKEVVKSMNG CONSENSUS/80% ht.h.p.t............ ...............ts...GlGl.lspthhp.htu CONSENSUS/65% Fp.hhphp............ .............thsG..pGlGLslspplspthsG CONSENSUS/50% Fcsahpsc............ ..........ttpptuG..sGLGLuls+pllcphuG O58222/1-144 S---------------ISVQTE-------------------------------------- CONSENSUS/80% p........ ..l.htst...................................... CONSENSUS/65% p........ ..lphpsp...................................... CONSENSUS/50% c........ ..lplpop...................................... O58222/1-144 ----------------------------VGKGTTFILKLPISM CONSENSUS/80% ............... ............tGs.h.h.h.... CONSENSUS/65% ............... ...........stGophplplsht. CONSENSUS/50% ............... ...........spGTsFplplPhst
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |