Consensus terms for the HDAC_interact domain

O74755_SCHPO/49-0EC--ISLTYRKLPDSWKQDKCSGRDDLD---NSVLNDDYISVAPKPSHVKN--IMHHENQ
CONSENSUS/80%    .sp.hssSY+hLPcp.....sotRsths....plLNDpWluhsshs.E-.s.a.t.+Kst
CONSENSUS/65%    pCpphGPSYRhLPKs.....CoGRscls...ppVLNDpWVShPohu.ED.u.Fhth+KNp
CONSENSUS/50%    sCcpsGPSYRLLPKspppssCSGRs-Ls...pEVLNDcWVSaPoWuSEDou.FlspRKNQ


O74755_SCHPO/49-0YLQALQLVEDERYDYDRVLNTTESAIKILANFCEPTIHEHLETALQ
CONSENSUS/80%    aE-sla+hE--RaEhDhhlpss.tshp.lp.h.pphtp.p.tttt.
CONSENSUS/65%    aEEsLa+sE-ERaEhDhhlEusppsIphLEtlhpphpphs.pcptp
CONSENSUS/50%    YEEsLFRsEDERaEhDhlIEuNpsoI+pLEsltc+lschos-E+us

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T