DBP2_YEAST/1-8 DDITKYLRED-----------------------------------GWPALAIHG------ CONSENSUS/80% p.htthhpt............. ...........th.hh.hpu...... CONSENSUS/65% ctltphLppt............ ...........thphhhlcu...... CONSENSUS/50% -plschLppp............ ...........shpsstlHG...... DBP2_YEAST/1-8 ------------------------------DKDQRERDWVLQEFRNGRS----------- CONSENSUS/80% ..............................th..ttp.thhpthtptt............ CONSENSUS/65% ..............................phstppRpphhppFppsph........... CONSENSUS/50% ..............................shsppcRpcllccFpsucs........... DBP2_YEAST/1-8 -----------------------------------PIMVATD------------------ CONSENSUS/80% ....................................hllsop.................. CONSENSUS/65% ...................................pllluTs.................. CONSENSUS/50% ...................................plLluTs.................. DBP2_YEAST/1-8 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ DBP2_YEAST/1-8 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ DBP2_YEAST/1-8 -----------VAAR--GIDVKG-INYVINYDM--------------------------- CONSENSUS/80% ...........hht...Glsl.t.hphll.hsh........................... CONSENSUS/65% ...........shsp..Glslst.sshVl.hsh........................... CONSENSUS/50% ...........lsup..GlDlss.lshVIpa-h........................... DBP2_YEAST/1-8 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ DBP2_YEAST/1-8 -------------------------PGNIED------------YVHRIGRT-GRAG CONSENSUS/80% ..........................hs.tt............hhpthGRs.tR.t CONSENSUS/65% .........................shs.tp............hhQthGRs.uRhs CONSENSUS/50% .........................shssss............hlQRhGRs.GRsG
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |