18160453/9-120 LRQAERDLIKAENDL-KTGDWDSAAFWSQQCAEKALKALL-LNAGKAYRG-HELLELA-- CONSENSUS/80% hppA.p.hp.Ap..h.ptshat.usahspQuhphhlKshl.h.htt...t.HslhtLh.. CONSENSUS/65% hcpAhchhctAchsh.ppGhYshusFhupQusEhslKuhL.hthssth.tsHslppLh.. CONSENSUS/50% lccAccaLcsA+psl.csGtYshAsFtupQAlEhuLKulL.lplsuphPcoHslpcLL.. 18160453/9-120 ----RVIKEEIGV------DVSPIEEDLRELTIHYVISRYPNA---ANAVPYELYDEKKA CONSENSUS/80% ......htp.ht.........pp.ht.h..lp..hh.sRY..............htcp.u CONSENSUS/65% ....p.ltphht.........cp.hphhphLpptYlhoRY...........h..asccpA CONSENSUS/50% ....ptlpchtph.....c.hcchtcplphLcctYltSRYsph.......shphYs+ccA 18160453/9-120 RELVERARRV CONSENSUS/80% cphlphsctl CONSENSUS/65% -chlchscpl CONSENSUS/50% EcslchuEcl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |