15|Q90415/1-16 QAADKQLFTLVEWAK-RIPHFS--DLPLDDQVILLRA----------------------- CONSENSUS/80% .hh..thh.hhpaht.th..hp...L..ppphhlhpt....................... CONSENSUS/65% phhphphhhhhcahp.phshFp..pLs.p-phhLlct....................... CONSENSUS/50% chsppslhpsl-as+.shstFp..pLspcDphsLL+s....................... 15|Q90415/1-16 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 15|Q90415/1-16 ----------------------------------GWNEL-LIASFSHRS--IAVKD---- CONSENSUS/80% ..................................hh..h.hhht.shh......t..... CONSENSUS/65% ..................................hhhth.hhlphshts..httpp.... CONSENSUS/50% ..................................shhph.hlLcpuhpo..spppp.... 15|Q90415/1-16 -----------------------GILLATGLHVHRNSAH--------------------- CONSENSUS/80% ........................hhh.ssh............................. CONSENSUS/65% .......................thhhhsshhhhhtph...................... CONSENSUS/50% .......................shlhssssshspssth..................... 15|Q90415/1-16 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 15|Q90415/1-16 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 15|Q90415/1-16 ---TAGVGAIFDRVLTE-LVSKMRD--------MQMDKTELGCLRAIVLFNP-------- CONSENSUS/80% ..........h.t.h.t.hh..h.p........hphs..Ehhhhhhhhhhp......... CONSENSUS/65% ....hhhht.h.phhpp.lhpthtp........Lplsp.Ehshhpslhhhs......... CONSENSUS/50% ...ttthtsthschhpp.llsslpc........LclsppEashLpAlllass........ 15|Q90415/1-16 -------------------------------------------DSKGLSN---------- CONSENSUS/80% ...........................................sh.thpt.......... CONSENSUS/65% ...........................................shttlpp.......... CONSENSUS/50% ...........................................stpsLssp......... 15|Q90415/1-16 ---PSEVEALRER-VYASLEAYC---KHKYP----------------DQPGRFAKLL-LR CONSENSUS/80% ....thhpphpp..h.ptL.tah.....p..................p...+hsplh .h CONSENSUS/65% ....phhpphppt.hhpsLhpah...hpptt................phstRhscll hh CONSENSUS/50% ..hpchlcchpcp.lsssLpcYh...pppps................ssssRaucLl tl 15|Q90415/1-16 LPALRSIG CONSENSUS/80% h..lpp.. CONSENSUS/65% hstlpphh CONSENSUS/50% lsslcphs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |