SPTREMBL|O26985|O26985AAL---KALADPTR-LL-IIYL-LS----EGDLC-VCE-IMAALK-----KPQPTISHHL CONSENSUS/80% thh...t.h.p..+.ht.ll.h.L.....tt.hs.hsp.l.p.ht.....hs.sslptpL CONSENSUS/65% phh...pslus.sR.hp.Ilph.Lt....ptphs.ss-.lsptls.....lstsslSpHL CONSENSUS/50% plh...+sLucssR.lc.ILph.Ls....cschs.ls-.Luctls.....lopuslScHL SPTREMBL|O26985|O26985NILRRAGFLK-----AEKR-----------GV-W--VH--Y---SLASD----------- CONSENSUS/80% phL.ptsllt.....tppt...........up....hh..a...tlt............. CONSENSUS/65% phLcctGllp.....pc+p...........Gp.h..hh..Y...plss............ CONSENSUS/50% +pLccsGLVp.....s++c...........G+.p..ha..Y...pLsst........... SPTREMBL|O26985|O26985--DLPSMIKQVIE CONSENSUS/80% ...h.thh..h.t CONSENSUS/65% ..phhphhtthhp CONSENSUS/50% ..cltchlpphlc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |