FNRL_RHOSH/1-5 GPMTFDLP---LTREEMADYLGLTLETVSRQVSALKRDG-VI---------ALEGKRHVI CONSENSUS/80% t...h.l....hspptluphhGhshtols+hhtthtpps.hl.........phpt.tth. CONSENSUS/65% pshthpl....hopp-lAphlGhohpTVoRhlppLpcpG.lI.........phps.tplh CONSENSUS/50% pusslsls...lo+p-IA-hLGlThETVSRsLscLcccG.lI.........slcu.+plt FNRL_RHOSH/1-5 VTD CONSENSUS/80% lhp CONSENSUS/65% lhs CONSENSUS/50% ltc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |