517417.Cpar_0396_from_18_to_147VLALILCQFV-PLDRFNQKPAPVTAI---------PDNVRGVLEAHCFQCHSEQTDWPK- CONSENSUS/80% hhhhhhh.hh..h...p......hp.............ht.lhppuC..CHo.ps.hPa. CONSENSUS/65% llshlslQhh.shtptppsssh.sph........ssttsptlhcpuChsCHSspophPa. CONSENSUS/50% llshlulQhl.Phpcspssssssu-s.......hssssspslhcsuChDCHSspTcaPa. 517417.Cpar_0396_from_18_to_147TAYFAPLSWYVTGKVKEARKALNFSNY-DAL----------SDTARQQLRNEVAGFIGST CONSENSUS/80% Ys.lsshp.hht.clptGhpthshs.h...............t..tttthtph.t.l.pt CONSENSUS/65% YuplsPsuhhhptclppG+cthNhoph.tsh..........spthppsphpcltphlpps CONSENSUS/50% YuplAPsSWllppDVccGR+chNaScW.ssh..........ssctscscLscltcslccG 517417.Cpar_0396_from_18_to_147DLSSHGRIPG--FPKIMMTEPERKTLIEWSRNNN CONSENSUS/80% pMP...Yh.h..H.tuplsttpcp.lhphhtt.h CONSENSUS/65% pMP.ttYhhh..H.pupLopp-+ptlhpWlpspp CONSENSUS/50% cMPsspYlhl..HscA+LocsE+csLlcWlcspc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |