455632.SGR_6445_from_159_to_264MVAVEF-DEFGAGRAED-----------------VHARLFA---DLMT--DLGLDARYGH CONSENSUS/80% lht.hh.-EhGtt......................H.tlat...phht..thshs..... CONSENSUS/65% Lhpshh.-EhGtup.tp.................tHsplat...chhp..shGls.t.h. CONSENSUS/50% Llcslh.-EhGsGsssc.................sHssLap...chLc..ulGlssspht 455632.SGR_6445_from_159_to_264YLDV----------APAQALATVNM-MSLFGLHRRLRG-----ALVGHFA-AVEITSSPG CONSENSUS/80% ...................ht..th...hhsh..t.hh.....thhuh.h.hhE...s.. CONSENSUS/65% ..............h.stshthssh.hhhhshp.p.hh.....thlGhhh.shEhhss.h CONSENSUS/50% hh............hsspshshssh.hhthuhptppah.....pslGtls.uhEttsssh 455632.SGR_6445_from_159_to_264----SRRLARALRR----AGAGPAA---QRFYDEHVE CONSENSUS/80% .......hhtthpc....hshs......h.aap.Hhp CONSENSUS/65% ....htphhpslpc....hGhs......htaaphHhp CONSENSUS/50% ....hpphscuLc+....hGlstt....spYFslHls
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |