O73954/1-47 GGDIYIIG--IKS------IEKFHYKG----KVYDLV-VENY----HNFIA---NGIA-V CONSENSUS/80% ttth...p..lhp......lp...........hYs...httt....tshls...sshh.s CONSENSUS/65% psphhhtc..lhp......lppht.p.....hlYsh..lppp....tshls...ssll.s CONSENSUS/50% suclhhsc..Vpc......lpptcts.....sVYDlp.lscs....csalu...NGll.s O73954/1-47 HNCSYPRT CONSENSUS/80% ps...... CONSENSUS/65% pNsshhtt CONSENSUS/50% HNsuthpp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |