O58310/1-124 AKCVDYDTEVLLGDG---RKRKIGEIVEEAIKKAEK-----------------------E CONSENSUS/80% ..Chs.ps.lhh.p....t.hthtcl.................................. CONSENSUS/65% stChsscshlhhtpt...shhplp-l.................................. CONSENSUS/50% usClsuDopVhlpcs...uplclc-L.................................. O58310/1-124 GKLGRVDDGFYAPINLELYALDV--------RTLKVRKVKADIAWKRTTPEKMLRIRTKR CONSENSUS/80% ..............s..lhshs................h.h.h.h..th.t.hhtlphpt CONSENSUS/65% ............p.s.pVhshs..........p.hh..hthhhhhc.ptppphhplchpp CONSENSUS/50% ............ptGccVluhDt.........psthphhphhhtpcscspcchhcIcTcs O58310/1-124 ---------------------GREIRVTPTHPFFTLEEGRI------------------- CONSENSUS/80% .....................t.tl.hT.tH.hhshps.................. ... CONSENSUS/65% .....................spplphTssH.lhshpstt................ ... CONSENSUS/50% .....................GcclplTssHhlhstcssp................ ... O58310/1-124 ------------KTKKAYELK-VGEKIATPR CONSENSUS/80% ..............h.stplp..sphlhh.. CONSENSUS/65% .............hhhupclc..G-hlhhst CONSENSUS/50% ............thhtAscl+.sGDplllsc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |