IBP2_HUMAN/1-1 FRCP-PCTPERLAACGPPPVAPPAAVAAVAGGARMPCA-------ELVREPGCGCCSVCA CONSENSUS/80% .tCs..C......tCss...................C.........h.h.sGCGCC.sCA CONSENSUS/65% hpCs.sCs....utCss.s................sCs.......thshtsGCGCC.sCA CONSENSUS/50% h+CP.PCsst..ApCPPsPs...............sCs.......cLlscDGCGCCsVCA IBP2_HUMAN/1-1 RLEGEACG-----VYTPRC--GQGLRCYPHPGSE-LPLQALVMGE---GTCEK CONSENSUS/80% h.cGpsCu.......h..C..u.GL.C....s....Phtth.......GhCht CONSENSUS/65% ttcGpsCG.....hhp..C..upGLpC.ssss...hPhpuhh.t....GhChs CONSENSUS/50% RpEGEsCG.....VYTs+C..usGLcCpPssupc.hPLpALltGp...GlChs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |