5141.NCU02011.1_from_25_to_106AEQQ-LSQA-AQTN--FSQYLVTLVQELANES-------AQSH----------------- CONSENSUS/80% App..Lpph.tp.......hh..h.thh................................ CONSENSUS/65% App..Lpphppp.......hh.hlhpllt..........tst.................. CONSENSUS/50% AEpp.Lcphpps.......ahstLhplLss.........psp.................. 5141.NCU02011.1_from_25_to_106-IRA---AAGIALKNAFSA--REFARQAELQAKWLQQ----------------------- CONSENSUS/80% .ht........hhcphlt...............W.......................... CONSENSUS/65% .hph......hhl+shlp..............pWp......................... CONSENSUS/50% .lRtt....ulhLKNtIst.............pWpp........................ 5141.NCU02011.1_from_25_to_106-----TDQDT---KTRVKQ---------LTLETLAS CONSENSUS/80% .....hs.pt...h..l+p..........lhthhhp CONSENSUS/65% .....lstpp...+ttl+p..........llphlhp CONSENSUS/50% .....lsp-p...+spIKs..........lLstlhs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |