O95376/208-270 EKY-RRYLFRDYVESH--YQLQLCPG-ADC-PMVIRVQ---------------------- CONSENSUS/80% tha.pphhhpphl......thhhCP...tC.thhh..t...................... CONSENSUS/65% pca.cphhhcphlps....phtaCPt..pC.shhhphp...................... CONSENSUS/50% c+Y.cchhhcshlcsp..ssh+aCPs.scC.utllpss...................... O95376/208-270 ---------------------------------------------EPRARRVQCN----- CONSENSUS/80% ...............................................ts..h.C...... CONSENSUS/65% .............................................tsps.phpC...... CONSENSUS/50% .............................................pssssclsC...... O95376/208-270 RCNEVFCFKCRQ-MY-------HAPT--DC CONSENSUS/80% tCt..FChtCt...h.......Hts...sC CONSENSUS/65% tCshtFChpCtt.sa.......Hssh..sC CONSENSUS/50% pCuppFCapCpp.sW.......Huss..oC
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |