Q9NYE5/1858-194 NSRHVSAY----------------------------GPGLSHG-------MVNKPA---T CONSENSUS/80% sstts.s......... .......h.Glptt.. ...ht..s...t CONSENSUS/65% sssclps......... .......G.Glpts.. ..hsspss...p CONSENSUS/50% Dsu+Vpsp........ .......GsGLcpu.. ..plspss...p Q9NYE5/1858-194 FTIVTKDA----------GEGGLSLAVEGPS--------KAEITCKDNKD---GTCTVSY CONSENSUS/80% F.lpsttt............s.hth.l.ssp...........h.h.p.ts...s.hthpa CONSENSUS/65% Fslpspsu..........G.utlpltlpsPst........htsplpcptc...GsaplpY CONSENSUS/50% FsVcspsA..........GsusLsVslpuPsG......tpscsplp-ssD...GoasVsY Q9NYE5/1858-194 LPTAPG--DYSIIVRFDD-----------------KHIPGSPFTAKITGD CONSENSUS/80% hs...G...a.ltlhhss...................l.tSPathts... CONSENSUS/65% hPppsG..paplplpass.................pplssSPFplpltts CONSENSUS/50% sPspsG..sYslsVpasG.................cslPuSPFpVpVsss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |