Consensus terms for the IL4_13 domain

IL4_MESAU        MGLRPQLAAILLCLLACTGNWTLG-CHH--GALKEIIHILNQVTEKG-T-PCTEMVVPDA
CONSENSUS/80%    MuL.sphh.hLhhhhhhsu.h.hs.p.p...sLcElIp.Ls.lstpt.p..C.t..V.s.
CONSENSUS/65%    MGLssQLlssLhCLLsCTusaspG.ssc..hsL+EIIcpLNplTpct.T.sCsEhhVsDs
CONSENSUS/50%    MGLosQLlssLlCLLuCTusas+Gpssc..hsLREIIcsLNplTp+t.T.sCTEhsVsDl


IL4_MESAU        LSARKNSTEKDLICRASQGFRKFYFQHEVTLCLK--------NNSRVLKDLKKLYRGISS
CONSENSUS/80%    h....Nhsttt.hCtA.psLpph....................pptl.t..phL.t.h.t
CONSENSUS/65%    lsAsKNoTEp-hhCRAucsLRpaYh.................ppSslhcpL+tLsRshss
CONSENSUS/50%    LsAsKNTTEKEhlCRAucVLRpFYtp+ths.phh........psSull+pL++LsRslsu


IL4_MESAU        LFPQKSCNVNESTYT--TLKDFLESLRRIMQKKYWQCGSSTF
CONSENSUS/80%    h.s.tp..sppsp.o..pltcFlppLhthhp.ha.ps.....
CONSENSUS/65%    LsstpsCsVsEuppT..TLpDFLEcL+oIM+pKYpps.....
CONSENSUS/50%    LsupsSCoVNEuspT..TLcDFLE+LKoIM+cKYpcss....

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T