Consensus terms for the IL7 domain 

IL7_BOVIN        CDISGKDGGAYQNVLMVNIDD-LDNMINFDSNCLNNEPNFFKKHSCDDNKEASFLNRASR
CONSENSUS/80%    CcIpsKDGtAYpsVLMlSIDp.LDpMhshDSNC.NNEPNFFKKH.CDDsKEAuFLNRAAR
CONSENSUS/65%    CcIpsKDGtAYpsVLMlSIDp.LDpMhshDSNC.NNEPNFFKKH.CDDsKEAuFLNRAAR
CONSENSUS/50%    CDIcGKDGKAYpSVLMVSID-.LDsMpshDSNCLNNEPNFFKKHlCDDNKEAuFLNRAAR


IL7_BOVIN        KLRQFLKMNISDDFKLHLSTVSQGTLTLLNCTSKGKGRKPPSLSEAQPTKNLEENKSSKE
CONSENSUS/80%    KL+QFLKMNIS--FplHL.pVSpGT.TLlNCTSK..................EE.KolKE
CONSENSUS/65%    KL+QFLKMNIS--FplHL.pVSpGT.TLlNCTSK..................EE.KolKE
CONSENSUS/50%    KLRQFLKMNIS-DFcLHLLTVSQGTpTLLNCTSKsKGRKPsuLuEAQPTKsLEENKSlKE


IL7_BOVIN        QKKQNDLCFLKILLQKIKTCWNKILRG
CONSENSUS/80%    QKK.NDhCFLKhLLpcIKTCWNKIL+G
CONSENSUS/65%    QKK.NDhCFLKhLLpcIKTCWNKIL+G
CONSENSUS/50%    QKK.NDLCFLKRLLQEIKTCWNKIL+G

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T