MET_MOUSE/13-132 DPVIT------------------SISPRYGPQAGGT-LLTLTGKYLNS------------ CONSENSUS/80% p..hp tht...u.htGup.hhhltsp..t. CONSENSUS/65% pspls plpsstushpGGp.hlhlsGcshct CONSENSUS/50% cPsIs plsPssGsssGGs.llsLsG+sl+s MET_MOUSE/13-132 ---GNSRHISIG--------GKTCTLKSV------------------------------- CONSENSUS/80% ..t.hhh..t.... .....tsph...... CONSENSUS/65% .htshhhthp.... ...tspssh.pt... CONSENSUS/50% .lsshthshc.s.. ...psssshpss... MET_MOUSE/13-132 --SDSILECYTPAQT-------TSDEFPV-------KLKI---DLANRET---------S CONSENSUS/80% pt.tlhhhsP..h.... ...h..sl.... ph.h ...tph.s.......... CONSENSUS/65% ppssllhpoPs.h.... .hshphsl.... plth .t.scs.s.......... CONSENSUS/50% cpsuIlscoPstp.... .sssssPlph.. clph .psscsps.......tst MET_MOUSE/13-132 SFSYR CONSENSUS/80% .aphh CONSENSUS/65% sFsYh CONSENSUS/50% sFoYl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |