IRF7_MOUSE/1-1 RGVQRVLFGDWLLGEVSSGQYEG-LQWLNEARTVFRVPWKHFGRRDLD-EEDAQIFKAWA CONSENSUS/80% hs.tt.tht.Wlltphpss.a.G.l.W.scp+phhplPWp+.tttshp.pt-t.ha.sas CONSENSUS/65% hsspphpl+sWLltplsSupaPG.LhWhsc-+ohFRlPWpHsscpshs.ppDstlFcsas CONSENSUS/50% tusp+s+LRsWLlspl-SGpYPG.LpWlDEEKTlFRIPW+Hsu+pchs.-cDuslF+AWA IRF7_MOUSE/1-1 VARGRWPPSGVNL-PPPEAEAAERRERRGWKTNFRCALHSTGRFILRQDNSG-DPVDPHK CONSENSUS/80% ..pGhh..u.pp...............tthhtphhpthpp.t.h....chst...st.h+ CONSENSUS/65% ht+Gthpsu.cphss............tpW+sphhsAhppspchp.hp-tsp.ssspsh+ CONSENSUS/50% pt+G+apsGsccsss............ssWKsphRCALppoc-FcplpDtSp.ssscsa+ IRF7_MOUSE/1-1 VYELSRE CONSENSUS/80% laplhs. CONSENSUS/65% laclhs. CONSENSUS/50% VYRLlPp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |