15072714 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 15072714 -------------------------------------------MKSTFSVIYYLKRQVVK CONSENSUS/80% ...............................................hphhhhlpppt.. CONSENSUS/65% .................................h.........hppphphhhhl++pp.h CONSENSUS/50% .................................M.........hcssh+lLFYl++sc.p 15072714 KDG----------------------TVPVMGRIT---------V-DGS------QTQF-S CONSENSUS/80% tpG.......................h.lhhchh.........h.stp............ CONSENSUS/65% csG......................phslhh+lp.........h.ssp......htth.o CONSENSUS/50% KsG......................psslhhRIT.........l.sGc......psph.S 15072714 CKLTVDPKLWDTKGGR-----VTGRSTAAL--------ETNRMLDKMRVRINKHYQEIME CONSENSUS/80% hth.h..p................p...t.........thNt...............h.. CONSENSUS/65% hph.l.sp.Ws.pttp.....hts+stps.........phNthlpph..th.thhtphhp CONSENSUS/50% sKlplsPc.Wsscps+.....sps+sppup........clNptLcphphplpphapclhc 15072714 RDNF-VTAEKVKNAFLGLEHRY------------------HTLMQVFRRHNEDYEKQVEA CONSENSUS/80% ttt..hphp.lhp.h.t........................thhthhpt..ppht..... CONSENSUS/65% ptth.loucplcphh.uhtt....................pshlphacpthcphppp... CONSENSUS/50% psss.loA-cl+cthpGpsspt..................pslLphaccpt-chccp.t. 15072714 GMKAKGTLLKYRTVYKHLQEFLTIR----YHVKDIALKELTPAFISDFEMFLRTDK---- CONSENSUS/80% ...t.tsh.th..shphhttah..........pcl.htpls.thhptap.aLhpt..... CONSENSUS/65% ..hs.uohppapsshppLppFhtt........pDlshpcls.sFlpsachaLpsph.... CONSENSUS/50% t.pupuThpsYcsshc+LpcFlppp....hthcDlsas-lstsFlccF-tYL+sct.... 15072714 ----------HCCTNTVWLYVCPLRT---------MVFIAINNEW--LT--RDPFREYEI CONSENSUS/80% ..........thp.soh..hhthh+t.........hh.hAhtpth..ht...psh.thph CONSENSUS/65% ..........shspsThhpahphl+p.........hlphAhppth..lp..tsPFtphch CONSENSUS/50% ..........shspNTlspYhppL+p.........llphAlpcch..ls..psPFsch+h 15072714 ----KKEETTRSFLTKEEIRLLMEG--KL-KNAK----QELY-RDLYLFC-AFT-GLSFS CONSENSUS/80% ....p..thphthLs.p-lptlhph...h.t........thh.+chFlFs.shs.GLtas CONSENSUS/65% ....chpcsc+paLot-Elpplhsh..ph.p.tt....hphs.+-hFlFu.CaT.GLsas CONSENSUS/50% ....cpccscRcaLTpEELc+Lhst..ch.cppp....hchl.RDhFlFS.CFT.GLuao 15072714 DMRNLTDENIRT-YFDEH---EWINI------NRQKTGVV-----SNIRLL----DIANR CONSENSUS/80% Dh.pLp.ppl.t...t......hlhh......pppKTt.........l.l.......sht CONSENSUS/65% DltpLphcplhp..tcsp...halph......pRpKTps.......pl.Lh....s.Ahp CONSENSUS/50% DlpsLoh-cIps.sp-Gp...hWIph......sRpKTsst.....splPLh....spAhc 15072714 IIGKYRG-------LC---G----------------D--GRIF--P-V------------ CONSENSUS/80% lltphtt.............................p..thlh..s.l............ CONSENSUS/65% IlpcYps............t................c..shlF..P.l............ CONSENSUS/50% Ilc+Ycs.......pt...c................c..splF..P.l............ 15072714 ------PHYNTCLAGIRAVAKRCGI--TKH---------------------ITWHQSRHT CONSENSUS/80% .......t.thhpt.l+thhthstl..ppp.....................lohHhuRHo CONSENSUS/65% .......s.pphsp.L+pluchsGI..pcp.....................loaHsuRHT CONSENSUS/50% ......hsssphNptLKcluctsGI..sKc.....................lTaHsARHT 15072714 AATTVFLSNGVPIETVSSMLGHKSIKTTQ-IYAKITKEK-LNQDMENLAARLNGIEEFAG CONSENSUS/80% aAo.hhlttGssltsluchhGHpslpsTp.hYuclhspp.h.pshpth............ CONSENSUS/65% FAT.lhLspGlsIpolSKhLGHsslpTTQ.lYA+lhspc.lpc-hpplttph........ CONSENSUS/50% FAT.lsLssGVPIETVSKMLGHosI+TTQ.IYAKls-cK.lscDMsplspchttht.... 15072714 CTI------------------------------------------------- CONSENSUS/80% .................................................... CONSENSUS/65% .................................................... CONSENSUS/50% ....................................................
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |