32469307 -----------------------------MALSVSWLDARL------------------- CONSENSUS/80% ..............................thsct.lcsh.................... CONSENSUS/65% M............................hcLTcptlcshp................... CONSENSUS/50% M............................hKLT+ssl-uLp................... 32469307 -------------NK----------------------EAKETVVKADRDGLSARVSPK-- CONSENSUS/80% .............sp......................tp.h.h.Dp...Ghhhtl.ss.. CONSENSUS/65% .............Pp......................spthplhDs..sGhhlplpss.. CONSENSUS/50% .............Pc......................cKpaplpDs.hsGhtl+VoPo.. 32469307 ---GKIVFQFRYR----FDGKQQRVDIGTYPL--MKLAEARNELDRLRAVLDQGRNPKLY CONSENSUS/80% ...Gthsahhphp.....tGppcphplGtas...hoht.ARp.h.thht.ht.G.sPttt CONSENSUS/65% ...Gt+sahhpYR....hsGcpc+lslGpas...lolppARphtpchhttlttGhsPttt CONSENSUS/50% ...Gp+sFhlpYR....hsG++R+loIG+Yut..lTlcpARcpAp-ltupVApGpDPup- 32469307 LQQERA-----------KYSANQSFESIFRDWIDSAGKQG--------LKEKTWHYQKRS CONSENSUS/80% htt................ptt.ohtphhptahtpht...........ht.psht..pth CONSENSUS/65% +ptt...............+ss.Thtplhcpahpcht...........hpspThcthpth CONSENSUS/50% +pps...............+sshTls-ls-calcctsp..........h+suThcsp+st 32469307 SEIYLLPRLGKYPLTDITELSLRNCLREVSE----------------------SSPSNTE CONSENSUS/80% hch.lhshhtph.l.clp.t-ltthhpchtt.......................t.ssAs CONSENSUS/65% lcptlhPhhGphhls-lpppDlpplhcclsp.....................tttsssAs CONSENSUS/50% l-+aIlPtlGc++ls-lTccDIppLhcclsc.....................cGuPuTAN 32469307 RLVSVLHKFYDWLIDE-------QILEI--NAAAGITAKKVGGKKGK-RTRVLNDNEIRI CONSENSUS/80% chhthlpphhshA..h.......uhh....NPsttl......hh.t..+pRhls.tEhth CONSENSUS/65% +shshlpphashAhth.......Ghhsp..NPsptlph....hpppt.+pRhLostEltt CONSENSUS/50% RllusL+plFNaAhca.......Ghhsc..NPuculct....t+css.R-RaLos-Elc+ 32469307 LWRYLHESK----ITEK-----------NRIYIKLLLLLGGRKGELIQAEKHHFDLQ--- CONSENSUS/80% hhphhpph.....tp.............hh.hhplhhhhhhRhsElhthcWs.lshp... CONSENSUS/65% hhphLpcht....pp.p...........hthsl+LhLhTusRpuElhphcWsplchc... CONSENSUS/50% LhcsLcctc....psss...........hpsul+LlLLTGsR+oEltsh+Wu-lDh-... 32469307 SAMWTVPIEI--------RKQGEKIGAPIMRPLIKPAIELIELAMQ----MSKSTYLFPA CONSENSUS/80% pthhhhPtp..............Ksst...h.lst.shplh.th.t......ts.alhsu CONSENSUS/65% pthhplPco..............KsGt..hlsLuptAhclltsh.p....tssssaVhPu CONSENSUS/50% sppWslPco..............KoGsshslPLScpAl-lLpslcp....tssSsaVFPu 32469307 NGQEELA-TNGFDTTI-----PNNVKIWARRS-----LGIEM-EHWSMHDLRRTMRTRMS CONSENSUS/80% ..........t.tt.h.....tth.tshtthh.....pthtl..ththHslR+ohuo.hh CONSENSUS/65% h.........sspp.h.....ssh.pshpplh.....ctssl..phshHDLR+Thuohhs CONSENSUS/50% s........hcss+sl...stsshspuWc+lp.....cpAul.sclslHDLRRThAThls 32469307 AIT--TQEVAELMIGHSK---KGLD-AIY-NQYQYLDEMRHAYDVWYQQLETIIEPTG-- CONSENSUS/80% p.G.hs..hhtthhsHpp....s.h.hhY..+hp..p.hpthhp.hsphh.thht..... CONSENSUS/65% psG.hshtsltphLuHpp...hssp.thY.s+hp.s-.h+tuhpphushltphhsspt.. CONSENSUS/50% ssG.hslcsIp+lLuHcp...suss.upY.s+s-.c-plRcAspclAstlcshsssps.. 32469307 --------FPFNWR---------------FGQ---------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% .....................Pth...................................t 32469307 -------------------------- CONSENSUS/80% .......................... CONSENSUS/65% .......................... CONSENSUS/50% .hhs......................
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |