46650 ------MAK---------------------------R------------RSR-------- CONSENSUS/80% ......M..................................................... CONSENSUS/65% ......M..................................................... CONSENSUS/50% ......Ms.................................................... 46650 -GD----------------GGL-------H------WD-EK------------------- CONSENSUS/80% .....................h...............p..t................... CONSENSUS/65% ....................tl.......p.......p.tp................... CONSENSUS/50% ...................ssl.......p.......c.cc................... 46650 -RQ--------------------------------R-WIATANLGF-D-----------P CONSENSUS/80% ............G......................t.a.h.h.................. CONSENSUS/65% ..s.........G......................p.athph.h................ CONSENSUS/50% ..s.........G......................p.apschph...p...........s 46650 SGK--RIVK------RGS------G--------KTK----------TE------------ CONSENSUS/80% tGp.....h...............t........tst..........tp............ CONSENSUS/65% sGp..tppt...............sh.......poc..........p-............ CONSENSUS/50% sGc..p+pp......hhp......ua.......cTK..........cE............ 46650 ---AKNKLKEVLR--------------------------------------DH------E CONSENSUS/80% ...s.t..tph........................................t.......t CONSENSUS/65% ...Appthtchht......................................ph......p CONSENSUS/50% ...Acpthsclpp......................................ch......p 46650 D-G-----------------------------L-AI-A---------------------- CONSENSUS/80% t.t......................................................... CONSENSUS/65% p.s.............................h........................... CONSENSUS/50% p.G.............................h.ss.p...................... 46650 -P-TG---YTVADA--------------V-N-D-WLA--YG-L-----AGRDQR------ CONSENSUS/80% ...tp...hphtph..............h.p...aht............thp.p...... CONSENSUS/65% .s.pp...hohtca..............h.p.p.Whp..h..p.....tplc.s...... CONSENSUS/50% .s.ss...hTls-a..............h.c.c.Wlc.ph..p.....ssl+ss...... 46650 --------------TVENCTHLSQ----------------------KHVIP-GL-GA--R CONSENSUS/80% ..............Thttht.hhp.......................hl...hh.sp..h CONSENSUS/65% ..............Thpphpthhc.......................hlhs.hh.Gp..h CONSENSUS/50% ..............ThpsYcstl+......................paIhP.tl.Gc..h 46650 KLR-------DL--SAEDVDRWLA-AKAQ------------------------------- CONSENSUS/80% .lt.......pl..p..thpphht.th.t............................... CONSENSUS/65% pls.......cl..sstplpphhs.phtp............................... CONSENSUS/50% cLs.......cl..sssclpcals.pltc............................... 46650 -----------------------------------------------------------T CONSENSUS/80% ............................................................ CONSENSUS/65% ...........................................................s CONSENSUS/50% ..........................................................ps 46650 LSTRSLQ----AVHSCLNRAVKRAM-AR--DKV---K--RNVVEL----C------SVPQ CONSENSUS/80% ht.phhp....thhthlpthhp.Ah.t...thl......psshth....h......th.t CONSENSUS/65% huhsshp....phhphlpshhphAl.c...thl...p..pNPspt....s......phsp CONSENSUS/50% hussTl+....pl+shL+sslctAV.cp..shI...s..cNPsct....l......clP+ 46650 -----GQ------PGR--------------------PSK------ALTFAQAEAVL---N CONSENSUS/80% ......t......t.t....................p.t......hhs.tphtthh...p CONSENSUS/65% .....tp......p.p....................chp......hhshcphpthl...p CONSENSUS/50% .....pc......c.c....................ctc......hlot-Ehcpll...c 46650 AAE------G-T----------S--MHA------YIVVALLTGARTEELR--ALTW-DHV CONSENSUS/80% hh.......t........................hhhhhhhsGhRhuEhh..uLph.pcl CONSENSUS/65% hhp......p.p..........t..hhh......hhhlhhhoGhRhGEhh..uLph.pDl CONSENSUS/50% slp......p.p..........p..hts......hhhlhhhTGlRhGEll..uLpW.cDl 46650 FLK-------------------------GSPDVEPP-QPPHIAVWRS-------V----- CONSENSUS/80% sht.........................tt..........hlplppt.......h..... CONSENSUS/65% Dhp.........................pt..........tlplp+s.......ht.t.. CONSENSUS/50% Dh-.........................ss..........slsls+o.......lp.p.. 46650 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ht.......................................................... CONSENSUS/50% hp.......................................................... 46650 -----------------------------RRGGDTKTRKSRRT--LALPARCVEVLWQHF CONSENSUS/80% .............................hhht.sKsttu.R...lsls..hht.ltthh CONSENSUS/65% ..........................tt.hhhtssKopsuhRp..lslssthhphLpphh CONSENSUS/50% .........................ttp.hhhssPKTcsSpRs..lslssplhchLccap 46650 ED-QGW-ERLA---AGD----KW-EE-----------H---------------------- CONSENSUS/80% t....................................t...................... CONSENSUS/65% pp...t...............................p...................... CONSENSUS/50% cc.ppp.........t........tt...........s...................... 46650 G--LVF-S--------SA-------VG---K--------PLDATNVRR---AF------- CONSENSUS/80% t..hlh..........t.........s...t.........ht.t.htp...hh....... CONSENSUS/65% s..hlF.h........st.......tG...p........shpssshpp...hh....... CONSENSUS/50% s..hlF.s........sp.......pG...p........Plsssslsc...pa....... 46650 ----RQA---------------------------------------------LK-D---- CONSENSUS/80% ....pth.............................................ht.t.... CONSENSUS/65% ....pph.............................................hp.p.... CONSENSUS/50% ....c+l.............................................hc.c.... 46650 ----------A---------NG----------------INA------D------------ CONSENSUS/80% ..........h..........s................l..................... CONSENSUS/65% ..........s..........s................l..................... CONSENSUS/50% ..........s..........G................l........s............ 46650 ------E-WTPRELRHSFVSLLS-D-R---------GVP--------LEEISRLVGHSGT CONSENSUS/80% ........hp.HshRHohsohhh.t.t.........uhs.........h.ltthhGHtsh CONSENSUS/65% ......t.lphHsLRHotuohhl.p.t.........Ghs........hpslpphlGHush CONSENSUS/50% ......p.lshHsLRHTaAolLl.p.s.........Gls........l+slpccLGHusl 46650 AV------------TEEVYRKQIRPVIQTGAVVMDG------------------------ CONSENSUS/80% th............ThphYs+h..t.tpp.htthtt........................ CONSENSUS/65% ph............ThphYsHhhtptpppsspthsp........................ CONSENSUS/50% ss............ThclYuHlssspcccsssplss........................ 46650 -------------------IFK---------------------------RGP-AR----- CONSENSUS/80% ...................hh....................................... CONSENSUS/65% ...................hht...................................... CONSENSUS/50% ...................hls...........................ttt........ 46650 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 46650 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 46650 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 46650 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 46650 ------------------ CONSENSUS/80% .................. CONSENSUS/65% .................. CONSENSUS/50% ..................
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |