3702.AT1G52000.1_from_1_to_126M-SWDDG-KHTK------VKRVQLTF-DDVIRSIEVEYDG-------TSLKSQPRGT--A CONSENSUS/80% Gt.ascu..hps......htphhhh.s.thlt.lphpY.p...........s..hG...h CONSENSUS/65% Gp.WDDG.sass......lpclhlttstpslphlphcYspt.....tt.h.sp.+Gtptt CONSENSUS/50% GspWDDG.sa-u......VsKlalspussuIpsl+F-YsKs.....sp.hhuspHGspsu 3702.AT1G52000.1_from_1_to_126GTKI----DGFTLS-SDEYITEVNGYYKTTFSGE-------VITSLTFKTNK-RTYGTYG CONSENSUS/80% ...............stEalhtlpuhhp.............hlptl.FpTsh.+h...hs CONSENSUS/65% ts.........hhphssEalsuVcGhas.............hlpsLpFcTsp.+su.hhG CONSENSUS/50% ps......pphllchPsEYIoSVEGpYcp..t........shIpuLpFKTNKsRoSsshG 3702.AT1G52000.1_from_1_to_126NKT---------SSYFSVAAPKDNQIVGFLG----SSSHALNSIDAHFAP CONSENSUS/80% .............p.h.ht..ts.tlhGhhG.....s...lpslGhah.. CONSENSUS/65% .............ppFslt..pstpllGFaG....pssttlsulGsaass CONSENSUS/50% ............tscFsLsptsup+IlGFHG....puussLsuLGuYass
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |