BAB21859/38-218 VSLADILSLRDRGLSEQEAWAVCLECSLSMRSVAHAA------IFQSLCITPDTLAFNT- CONSENSUS/80% holt-llp.httshpEtphhAlhhtshttLp...t..........t.lh.s.shhhh... CONSENSUS/65% hSLp-llphhppslsEpphhAVshpshpuLp.h.p..........tplh.shshhlth.. CONSENSUS/50% lSLsDILcl+cpPLsEEElWAVChpsscuLcslsctt......htcsIhlotDsll+s.. BAB21859/38-218 SGNVCFMEQLSD-----DPE-GAFVPPEFDVTGNT------------------------- CONSENSUS/80% .G.hs..............t..hhhsPt................................ CONSENSUS/65% tGssshhs.tts.......s.shhhsPph..t............................ CONSENSUS/50% cGuVuhpssssu.....pss.shasAPElspphs.s........................ BAB21859/38-218 ------------FEAHIYSLGATLKAALEYVAEPTLEPRLSQDLEALLSRMQAEDPGDRP CONSENSUS/80% .............t..l.sLGhhhhthhpht.s..p...lt..h..hh...st....... CONSENSUS/65% ............pphplhSLGhslhpuh-hths.pp..tLst.Lp.hhshhspp....tt CONSENSUS/50% ............ccscIaSLGhslacAl-aclPpscEppLSspLcsllstMssssttcps BAB21859/38-218 DLESIIALCEEK------------LQLTSSCRVCRSLSAVGRRVLSIESFGALQDVSESS CONSENSUS/80% ..tt.....................thtt.hphC.h.t..t.p....ph.thh.hh..ts CONSENSUS/65% p.pt....................tphpphhphC.h.phsttctsstchhshhphhhtps CONSENSUS/50% sscshpths...............soacctlclC.us+hspcRssss+lpusspushscs BAB21859/38-218 WRE CONSENSUS/80% .p. CONSENSUS/65% hp. CONSENSUS/50% h-p
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |