CA17_HUMAN/1-5 DPCSLP------------------LDEGS---CTA------YTLRWYHRAVTGS-TEACH CONSENSUS/80% ..C..s...................t.G....stt.........paaas.ttt....pC. CONSENSUS/65% phCt.s..................hptGs...Cps......hh.+aaasspsp....pCp CONSENSUS/50% ssCpts..................h-sGs...Csu......phsRaYYsssop....pCp CA17_HUMAN/1-5 PFVYGG-----CGG-------NANRFGTREACERRCP CONSENSUS/80% .F.YtG.....stG.......NtNpF.o.ppC.phC. CONSENSUS/65% tFhYsG.....CtG.......NtNpFtohppCpphCh CONSENSUS/50% sFtYuG.....CsG.......NsNNFpopc-CcptCs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |