1148.slr0756_from_5_to_288LSLCLF-APEHVAH---RLRSIF-QGDRHYLSTFQALDD-------FCAFLEDKPERIDC CONSENSUS/80% Lslshhhts.tlsp...thpphL..scRapl.hhp..tp.......hhthlctppcplDs CONSENSUS/65% LoIshhlss.tlsp...shpphL.ss-RYplhhhsttpc.......hlphlEppp-pIDC CONSENSUS/50% LoICLllsscsLsp...ulsphL.suDRYpLsllsssc-.......LlshLEsc+EcIDC 1148.slr0756_from_5_to_288LL-VYYEANSLPVLN---RLYEQGRLLPIIL--------LEPS---------------PS CONSENSUS/80% ll.l.tt.....hhp...pLhtpuhLlPsll........lt................... CONSENSUS/65% Ll.l.ps.t..tlhs...pLhppGhLLPsll........ltt.................. CONSENSUS/50% Ll.lcpssslpslhs...QLacpGlLLPAVl........Lssthsps...........ss 1148.slr0756_from_5_to_288ALA-KTTDEHPTIVYHNAEIHLPESQWSE----------------LPTVVDRAIAHYLHL CONSENSUS/80% ..............YHsAElhl.hspLtp................ls..l-tAIspFLch CONSENSUS/65% .............hYHsAElplshspLpp................lsh.lDpAIucFL+L CONSENSUS/50% s.t.tsp.pt.shlYHsAEl+LslcQL-p................LshsIDpAIA+FL+L 1148.slr0756_from_5_to_288GPICTLPNQTETIPAPIVD-ESSQSFLLLQQRRLADKLKERLGYLGVYYKRKPSHFYRNF CONSENSUS/80% u.ssthspts..........t..ps.....Q.+Lup+LpERLGYLGVaYKRsPphFh+ph CONSENSUS/65% usssshssps...st.....p.pps....QQpRLupKL+ERLGYLGVYYKRsPphFhRsL CONSENSUS/50% uPuCuls-csppsups....-sscuhLhhQQRRLA-KLKERLGYLGVYYKRDPppFaRNL 1148.slr0756_from_5_to_288SPQEKQEYLEDLSSQYREIILSYFSDEGTVNDLLDQFVNQAFFADLAISQILEIHMELMD CONSENSUS/80% sstEppchltplptpYR-lllsYFpps.shNptl-pFVspsFFuDlslophlEIHMcLhD CONSENSUS/65% sspE+p-LLppLptpYR-IlLsYFspssslNptIDpFVNpAFFuDlulopllEIHM-LMD CONSENSUS/50% uPcE++ELLcpLcssYR-IlLsYFuc-uslNQuIDsFVNpAFFADISVSQlLEIHMELMD 1148.slr0756_from_5_to_288EFSQHLKLEGRSEEVLLDYRLVLIDILAHLGEMYRRSIPRE CONSENSUS/80% pFupQL+LEG+p--hL.DYRLsLlDlhAHLsEMYRRSIPt- CONSENSUS/65% -FupQL+LEGRSE-lLLDYRLsLIDlhAHLsEMYRRSIP+- CONSENSUS/50% EFuKQLKLEGRSEEILLDYRLTLIDVlAHLCEMYRRSIPRE
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |