439843.SeSA_A0630_from_6_to_102/1-97FNTPIRVDESGMICLTDMWK-----ASGKSESESP-----YHYLRNKQTKEFLAELEKNH CONSENSUS/80% th.hhpp.tpshhshsph.........tt.tptt......pphhcpp.t.thht.h.... CONSENSUS/65% phhlh+ppp-shlshoplhp......huthpppp......ppaLcpppstphhpthpt.h CONSENSUS/50% slslhR+spDsalshTslh+......suuhccsct.....scaL+scsTp-hlpclptsh 439843.SeSA_A0630_from_6_to_102/1-97E----------------------------------------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% s........................................................... CONSENSUS/50% s........................................................... 439843.SeSA_A0630_from_6_to_102/1-97---------------------------------SVVFTERGVHG----------GTYGGK CONSENSUS/80% ..........................................hp..........Gsah.. CONSENSUS/65% .........................................hhp..........Goal.h CONSENSUS/50% .....................................t...plp..........GTWlsh 439843.SeSA_A0630_from_6_to_102/1-97FVAYDYAAWLNPGFKYA------AYKVLDDYFTG CONSENSUS/80% .hshthu.....path.......hhp.h.ph.t. CONSENSUS/65% cluhthAt....caplh......lhc.hpphppt CONSENSUS/50% -lAhslApWhSscaslh......ll+shpclpps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |