7165.AGAP004100-PA_from_37_to_KTSGSSKGMR--EFLEQE-LVDFSR-ANPGVVVYVKP----------------------- CONSENSUS/80% p.stsp.GhR..pFlppt.h.pht...NPth.h.lp........................ CONSENSUS/65% ppusuStGhR..pFlppp.hsphpp.tNPpl.lhlpp....................... CONSENSUS/50% psusuSpGsR..cFlcpp.lsslpc.pNPslslhl+c....................... 7165.AGAP004100-PA_from_37_to_----------RRHRTAV-------MSAEFLNGERTW-----INCRNNSREEISKWIQVLK CONSENSUS/80% ..........p.s..Ph.......lhs.a..Gtph......hshpshp.ppl.phlt.hh CONSENSUS/65% ..........pps.pPt.......lhucYtpGpcpp.....lslpshsspplhptlpplh CONSENSUS/50% ..........ssuspPp.......lhAcYpsGpE+s.....lslcNhos-cItcplppLs 7165.AGAP004100-PA_from_37_to_QSN CONSENSUS/80% ptp CONSENSUS/65% pps CONSENSUS/50% ssu
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |