5270.UM06280.1_from_771_to_939NVLIMTTRVAQKSYGAEKRFLCPPPLVILIGSSWW-NVCPASTRPSPFAPAGAADPDQAA CONSENSUS/80% slhlhHupVAQKSYGsEKRFhCPPPhlaL.G.sWt...t..................... CONSENSUS/65% slhIhHAKVAQKSYGsEKRFFCPPPslaL.GsuWphtpp.h................... CONSENSUS/50% oVlILHAKVAQKSYGNEKRFFCPPPCVYLhGsGW+h+ppth.t...s............. 5270.UM06280.1_from_771_to_939PTVLSPPRVT----------INISGEPGVQDGALEWASSSGRLID---VGNPSSEMA--- CONSENSUS/80% .........t...hhh...shtt.sptt.pp.thp......................... CONSENSUS/65% .........stphhshh..Glss.sppthpphphp......................... CONSENSUS/50% ........pusplsuah..Glsu.u-schQphslss........................ 5270.UM06280.1_from_771_to_939--ISGRCIGKQLYISDVD--EKRRHVEALVAISVP------------GS----------- CONSENSUS/80% .....hsssKtLalosss...K+Kph.l.hphhh..............t........... CONSENSUS/65% ...ptassAKsLaISDsD...KRKpFpLplchhh.............sstp......... CONSENSUS/50% ...csassAKoLaISDoD...KRK+FcLsl+lFa.............usGp......... 5270.UM06280.1_from_771_to_939--------------------------SPMDRRLLGT------------------------ CONSENSUS/80% ................................plGh........................ CONSENSUS/65% ................................clGh........................ CONSENSUS/50% ................................-lGs........................ 5270.UM06280.1_from_771_to_939-----------------------FPSRPIKVISKPSKKRQSSRNTE CONSENSUS/80% .......................F.St.IplISKPSpK+pph+stp CONSENSUS/65% .......................F.Sp.I+VISKPSKK+QohKNs- CONSENSUS/50% .......................FpS+cIKVISKPSKKKQShKNsD
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |