162425.CADANIAP00008408_from_17_to_94DPESS-RLLE---DDIYQPGYSYGALNHNQQAN----------QPDPGYVRREREALEAI CONSENSUS/80% .sEpp..LL........t.....t...................pt.......cpttLptI CONSENSUS/65% ssEps.pLL........ps..tht...ps..t...........cpD......-pptLspI CONSENSUS/50% ssEco.+LLs...t.sppssssasphssss.ss......p...csD.....tEpsALscI 162425.CADANIAP00008408_from_17_to_94CQRTSD-----------SVIDIW---SLQPQPHLQPQATLH-----NSVSS CONSENSUS/80% ltpssp...........plIDl.....hpsp..h..tp.hp.....t.hst CONSENSUS/65% lpcTus...........slIDlu...thssps.hpppphhs....hpthsp CONSENSUS/50% lscTu-...........NlIDVo...ulssps.lpppcshc...phpsYus
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |