DNLJ_ECOLI SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV CONSENSUS/80% ph.tph.pLtp.lp.aphtYYs.stP.lsD..YDtLhppL.tlEtpaPchht.pSPoppl CONSENSUS/65% psppchtcLpc.lppasacYYlhcpP.lsDt-YDpLhccLptlEppaPEhhss-SPTpcV CONSENSUS/50% cupcclpcLccplccHsYcYYVLDsPpIoDuEYDcLhRELccLEccaPELtoPDSPTQ+V DNLJ_ECOLI GAAP-LAAFSQIRHEVPMLSLDNVFD---------EESFLAFNKRVQDRLKNNEK----V CONSENSUS/80% Gst...ttFt.l.H...MhSlsssas..........p-ltta.p+htt.h.......... CONSENSUS/65% Guts..stFptVtH.h.MhSLcNsFs.........tc-lpsa.pRlpp.ls......... CONSENSUS/50% Gups.tusFspVcHssPMLSLDNAFs.........c-ELcuFtcRlcctLut.......h DNLJ_ECOLI TWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN----I CONSENSUS/80% .h.hE.KlDGlulslhYcpGhhs.uhTRGsG.hGE-lT.NlhsItslP.pl......... CONSENSUS/65% tassE.KlDGlulsLhYcsGhLspusTRGDGhhGEDlTtNl+TIpslPhplt........ CONSENSUS/50% sYslEhKIDGlSVuLhYEcGlLVpAATRGDGpsGEDVTpNl+TI+sIPh+Lstp.....h DNLJ_ECOLI PARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFC CONSENSUS/80% ...lElRGElhh.httF.tlNtp..t.t...FtNsRNuAuGoLRphssphstpR.Lphhh CONSENSUS/65% .tplElRGEVahshpsF.tlNpphtptsp..FANPRNAAAGoLRQlDsplsApRtLphhh CONSENSUS/50% scclEVRGEVahs+csFpcLNccpccpGcp.FANPRNAAAGSLRQLDPclTA+RsLchas DNLJ_ECOLI YGVGVLEGGEL----PDTHLGRLLQFKKWGLP-VSDRVTLCES---AEEVLAFYHKVEED CONSENSUS/80% ashs..............p.t.hthltphGh..hp.h.thhts...httl.thhpth.tt CONSENSUS/65% Yuluhstt.........sphptLphLpphGFs.lstthphsps...hppVhphhpphtpp CONSENSUS/50% YulGpspshth.....topa-sLpaL+chGFP.Vssps+tscs...h-EVlcahccapcc DNLJ_ECOLI RPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGA CONSENSUS/80% Rtphsa.hDGhVlKlsphs..p.lG.ss+tP+aAlAaKasspph.Thl.sl.hpVGRoGh CONSENSUS/65% RppLsaplDGlVlKlsplshpccLGhTu+tPRWAlAYKFPspct.TpLhsl.hpVGRTGt CONSENSUS/50% RcsLsa-IDGVVVKlDcLshQccLGaTu+uPRWAIAYKFPAEEspT+LlDIplQVGRTGs DNLJ_ECOLI ITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP CONSENSUS/80% loPhA.lpPV.ltGshVppsoLaN.s.lpchsltlsDhVhl.+uGtlIPplhtshhphRs CONSENSUS/65% lTPlAhL-PVhluGshVspATLHN.c.Icchsl+IGDtVllp+AG-VIPcllpVlhphRs CONSENSUS/50% lTPVApLEPVpluGosVSRATLHNpDhIccKDIRIGDpVlVcKAGDVIPcVlcVlh-+Rs DNLJ_ECOLI ED--------------------------------TREVVFPTHCPVCGSDVERVE-GEAV CONSENSUS/80% st................................t..h.hPp.CP.Ctp.lhp.t...h. CONSENSUS/65% sp................................pp.hphPptCP.Csstlh+.t...ss CONSENSUS/50% uc................................p+sachPspCPsCuScLl+pc.s-ss DNLJ_ECOLI ARCTGG-LICGAQRKESLKHFVSRRA CONSENSUS/80% hhC.s....C.st.hptlhaasu+ts CONSENSUS/65% hRCsNs...CsuphhEtltaasS+pA CONSENSUS/50% hRCsNs..sCPApthEuIpHFASRsA
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |