Q61JK8_CAEBR/79-209AVFS-VDGSLTAS------VSVTGKD-PRVRPGAVDVVRYWQE-------QGYLIIYLTA CONSENSUS/80% lVhS.lDGolTtS......hshhGc..shs+.Ghsplhpphpp.......pGY.hlYlou CONSENSUS/65% lVlSDIDGTITKSDsLGclhshlG+..DWoHsGlucLascIpp.......NGYpllYLTu CONSENSUS/50% lVISDIDGTITKSDsLGHllshlG+..DWTHsGVAcLYocIpc.......NGYpIlYLTA Q61JK8_CAEBR/79-209RPDMQQRVVSAWLAQ----------------------------------HNFPHALLFFN CONSENSUS/80% Rs.hQtp.sptaL.t..................................hphPpGslhhu CONSENSUS/65% RuluQuphT+saLtpltpsu.............................hpLPcGPVhhu CONSENSUS/50% RulGQAcpTRsYLpslpQsG.............................apLPcGPVlLS Q61JK8_CAEBR/79-209NS----------FSTEPLKQKSLHLRHIVDM----------------------------- CONSENSUS/80% ss..........l.+cP..aKhthLpslhp.h............................ CONSENSUS/65% PsphhsuhppElI.+cPchFKhusLpclpplF............................ CONSENSUS/50% PsplhsAL+REVIp+KPEhFKlACLcDI+sLF............................ Q61JK8_CAEBR/79-209------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ Q61JK8_CAEBR/79-209-----------GVHIHVAYGS-SKDVSVYTSAGVDPEHVISVAGSRRRCVQ CONSENSUS/80% ...........t..haAuaGs..pDhhsYptlsls.t+lahls.tu.hh.t CONSENSUS/65% ..........pppPFYAGFGN+.sDshuYpslGlPts+IFhlsspuclphp CONSENSUS/50% ........ssspsPFYAGFGNRhoDshoYpuVGlPss+IFTIsssGcl+pp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |