3914002|sp|O/1- RLAILPFRNKV-LLPGAIIRIRCTSH-SSVTLVEQELWQKEEK--GLIGILPVRDDAEGS CONSENSUS/80% phshhsltt...laPthhh.l.l.p..t.hthlcthhttpp......hhhhh.pt.t... CONSENSUS/65% plPllslpshs.laPthshslhltct.pshphlcpthpppp.....hhllhhpcptppp. CONSENSUS/50% plPlLPLcstl.lFPshslPLhlscc.+slpAlccshsscp.....hllllsp+csssp. 3914002|sp|O/1- SIGTMINPGAGSDSGERSLKFLVGTTDAQKSDAKDQQDLQIAYKVSTDK----------- CONSENSUS/80% ........................................hhthushspl.ph....t.. CONSENSUS/65% ......................................tplapsGsluplhphhphsss. CONSENSUS/50% ..................................psshs-lasVGolApIhplhcls-s. 3914002|sp|O/1- ------------------------------WHTRGVAARALHLSRGVEKPSGR-VTYVVV CONSENSUS/80% ......hphhh.s...tRhtl.p..................................... CONSENSUS/65% .....shplllpG..hpRh+l.ch..tt................................ CONSENSUS/50% .....shplLlpG..hpRs+lpchhpsc................................ 3914002|sp|O/1- LEG--LSRFNVQELGKRGP----------------------------------------- CONSENSUS/80% ..........................................................sp CONSENSUS/65% .......................................................hh.sp CONSENSUS/50% .......................................................ahpuc 3914002|sp|O/1- ------------------------------------------------------------ CONSENSUS/80% hp.............................................h..thh..h.th. CONSENSUS/65% lp.lt...........................ttpp..........shhptlhpthpphh CONSENSUS/50% lchlp.........................hhpssct........pulscsllpphcplh 3914002|sp|O/1- -----------------------------------YSVARITSLEMTKAEL--------- CONSENSUS/80% t...... .....t....h...............p...hs.hhsshh.h........hht CONSENSUS/65% phpt... ..h..c.h.tlt.............pcssplsshlsshhshp..ppppplLp CONSENSUS/50% phsp... ..hhs-tltslpp............c-PucLuDhlAuplslpt.p-+QplLE 3914002|sp|O/1- --------EQVKQDPDF--------VALSRQFKTTAMELVSVLE------QKQKTGGRTK CONSENSUS/80% ..p......t+l..hh.hh.t.. ..................... .......... CONSENSUS/65% h.sst....pRLpphhthhpp.. ..................... .......... CONSENSUS/50% tsslp....cRLccllshlpp.. ..................... .......... 3914002|sp|O/1- VLLET--------VPIHKLADIFVASFEMSF-EEQLSMLDSVDLK----VRLSKATELVD CONSENSUS/80% ..... ..................................... ........... CONSENSUS/65% ..... ..................................... ........... CONSENSUS/50% ..... ..................................... ........... 3914002|sp|O/1- R-- CONSENSUS/80% ... CONSENSUS/65% ... CONSENSUS/50% ...
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |