Q9U5D8/21-818 -WNTGYQYVYNFEARTVAGIHQ-V----ADQYSGNYIRGKLYAYVEPDNK-------VTF CONSENSUS/80% .atstppY.Yphpuhhhssl.t......t.t.sshhhpupl.lp..s.t........hhh CONSENSUS/65% .apssppYhYphcupshsuL.p......ssthuGhhlpuplplpshspsp.......hhh CONSENSUS/50% .apsu+pYsYca-u+sloGLsp.s....usspoGlplcuclpIpspusss.......hpL Q9U5D8/21-818 QFQDAKYADFNEHFPEG--WATDLHHYQFSYKSFPIKND--------------------V CONSENSUS/80% pl.psphtt.tt...............t..hp.h..tp...................... CONSENSUS/65% plpssphsphpt.........pp....phphpph.hpph....................s CONSENSUS/50% +lpcschushss...t...aspchhppstphssthtppp....................s Q9U5D8/21-818 FQVYFN-NGLVDK--LFVYKDIPHWELNFIKAIASQFQTDVQGQNLKKSKFNDVPKG--- CONSENSUS/80% h.h.hp.tthh.t..lhs.tt.s.h.hNhh+ulhs.hQhshpttp............... CONSENSUS/65% h.lphp.ssshhs..lhsspshsshtlNlh+ullshlQlshptpp............... CONSENSUS/50% hsl+achsuulls.plhsscslssaslNlhKGIlShLQlslpssps..t........... Q9U5D8/21-818 -NQLTGIFKTWEDSVNGEYEVMNEVSVLPEYLIESQPELAPLPHLRNE-G-EFYELLKTR CONSENSUS/80% .......hth.E.sltG.Cps.Ythp...p.........................lhKot CONSENSUS/65% ......haph.EsslpGhCcshYslpp.sch.h....................h.lsKop CONSENSUS/50% ......saclpEssVsGcCcTpYslschscspth...................l.lsKo+ Q9U5D8/21-818 NFSSSNRH--LVYRYGFNGHEG-WDAGTNQMGNFLSRTSQSRIILSG------------- CONSENSUS/80% shspCppp....hthsh..ht..h..s.t......sp..hp.hhhst............. CONSENSUS/65% shspCpp+....hphGhs.hsp.httsppphtthhupsshshhlhss............. CONSENSUS/50% NhssCpcR..hshchGhssasptsssspspspshpusssssptlpsu............. Q9U5D8/21-818 ---KLNRFTIQSSVTTEKVLIAPHIYNSQKGMVGSRVNLTLDDYSNFK-GSVPTISNP-- CONSENSUS/80% ........hh.s..p..p.hh..p.htt..h.h.st.phth.phpt.............. CONSENSUS/65% .....t..hlpusssptp.hhs.phhss.tuhh.up.plpl.phpst....h...tt... CONSENSUS/50% ...ptsthhlpussspschllsPshhsupsuhspo+psLsLpclpsss..stsssuss.. Q9U5D8/21-818 KTVNNLVYEYEYG-KPQNGESSEESSSSSSSSSSSSSS---------SESSSSSSDESNW CONSENSUS/80% ..httl.aphtt................................................ CONSENSUS/65% tphtsLhYpaspt............................................... CONSENSUS/50% pspssLlYcasss............................................... Q9U5D8/21-818 NQSLRKPASATSTGSLSSSSSSVSSSSSSSEETNYNGGLKRKTRSVTPPPHSSSS----- CONSENSUS/80% ..........................................hp................ CONSENSUS/65% ....................................p..hp.hp................ CONSENSUS/50% ..................................ttpp.hpth+st.............. Q9U5D8/21-818 --------SSESSSASSSSSSSSDE---------------SSNSPIRQGASSSSSSSSSS CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ Q9U5D8/21-818 -ESSSISSSEE--YLSRQP-EINEVPKIEFLPDQMVN-----FRSESGHTVDNIVKVARQ CONSENSUS/80% ............................................t...p..p.h.plhpt CONSENSUS/65% ............................................stpsphhphlpcLspp CONSENSUS/50% ............................................sscsplscslp+Lspp Q9U5D8/21-818 IGKFLEY----PSNIPKDNVLTYYSLLPHLIAAANSKQLEQATEKLYYPEERIQGSTN-- CONSENSUS/80% ..tphpp...............hh..hhphhp.hs.ppltthhpph..t........... CONSENSUS/65% htpplpp..............tpahtLlpllRhhshcplpplhpphhtp........... CONSENSUS/50% sssclpcp............ssKFspLlcLLRsssp-slppltcplpsp........... Q9U5D8/21-818 -KEVYHYYRSWQVYRDAVAQAGTGPALVTIYSWLKS--AKVRENEGAQLLAVLPKAARYP CONSENSUS/80% .........hh.hhhssls.suo.sshthlhphh.t..tplp..tttphhh.h.thh..s CONSENSUS/65% ........thhphhhDulstsGTtsulphlhphlps..pclp..cuuphlhshhphs.ts CONSENSUS/50% .......hphpphahDAVspAGTssAlchIpptIps..cclostEAApllsssscsltpP Q9U5D8/21-818 TTEYMDYLFGMVKSKEIQNQKYLNDSAVLSFADLVRRSQ--VDKKSAHQRYPIHLYGAEA CONSENSUS/80% s.phhp.h.thhpp....pt.hlptsshlshsshhp..p...t................. CONSENSUS/65% stchhphhhphhps.psppp.hLppsshluaushlpthp..spp.t.............. CONSENSUS/50% spchlcthtsLscssplpppshLspoulLuausll+csC..ssssss............. Q9U5D8/21-818 LNH-FAVVIEKYIPYFQGQLRKAV--QKGDSIQIQVYIRALANMGHPTVWAGFEPYLE-- CONSENSUS/80% .........t.hh..h.t.htps...tttp..ph.lhl+sluNhu..t.l.hh..hh... CONSENSUS/65% .........pphl.hltp.lppuh..pptsp.ch.lhl+uLGNhGpsp.lthhp.hl... CONSENSUS/50% .......hhpchlphlpcplpcAl..scs-ppchplhlKALGNsGHPsslpslphaLpt. Q9U5D8/21-818 ---GKYPVTDFQRLVMIAYLG--DMIKVHPNTARSILYKIYQNEG--DVPAIRVAAVMQL CONSENSUS/80% ....t.th..h.ph.hl.uhp...hh...sp.hpthhhtlh.spt.....clRhhAhh.h CONSENSUS/65% ....ttphs.hh+hthlhuLc...hsphpschspplhhplahsps...tsElRhhAhhhl CONSENSUS/50% ...uspslssplRlsAltAL+..plscppP+plpslLhplapNpu..-ssElRhsAshsL Q9U5D8/21-818 MKTNPPASLLQRMAEHTNYDH--SEHVNAAVKSAIE CONSENSUS/80% hps.Ps.thhpthsp.h..-...s.pVtuhhhohhc CONSENSUS/65% hcopPshshlpphuphhpp-...s.pVtuhlhStlc CONSENSUS/50% hcTpPssullpplAchsppEs..spQVsuFVtStl+
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |