Consensus terms for the LYZ1 domain

LCA_MACRG        IDYRKCQASQILKE--HGMDKVIPLPELVCTMFHISGLSTQAEVNNHS--NKEYGIFQIS
CONSENSUS/80%    +.hp+C-Lupth+c..hssatshoLspWhChs.aESsasTpAhs.Nss..Ss-YGlhQIN
CONSENSUS/65%    KhapRCELA+tLKc.thDGYcGhSLusWlChupaESsasTpAsNhNsss.STDYGIFQIN
CONSENSUS/50%    KlacRCELARsLK+hGlDGY+GlSLANWVClA+aESuYNTpATNpNsustSTDYGIFQIN


LCA_MACRG        NDGWCAE---KQEDVANSVCGILCSKFLDDDITDDIECAKKILQLPEGLGYWKAHETFC-
CONSENSUS/80%    s+aWCps...sps.tuhNhCtlsCstLLpsslstsltCAK+llpp.pGhpsWhAW+thC.
CONSENSUS/65%    S+aWCss...u+TPtuhNhCpIsCstLLpDDIocsltCAK+llpc.pGlpAWlAW+s+Cp
CONSENSUS/50%    S+YWCND...GKTPsusNsCcISCSALLsDDITcuVsCAKKIVcDspGIcAWVAW+s+Cp


LCA_MACRG        LEDLDQWR--C-
CONSENSUS/80%    spclptal..C.
CONSENSUS/65%    spDlppalpsCt
CONSENSUS/50%    ucDlspalcGCp

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T