ATL_STAAU/1-165 QFLKGKGVL-----ENQGAAFNKAAQMYGINEVY---LISHALLETGNGTSQLAKGADVV CONSENSUS/80% p..hs.s.......th.tphh..At.h.ph.tl....hlupuhLEos.GsStlup..... CONSENSUS/65% chhhstush.....shhsphhstAtphhph.tlh.phlIupAhLESuaGoStLAp..... CONSENSUS/50% Khthspuot.....salsplhspApcthphsslhsSllIAQAsLESGWGoSpLAp..... ATL_STAAU/1-165 NNKVVTNSNTKYHNVFGI---AAYDND-PLREGI-KYAKQAG-WDTVSKAIVG----GAK CONSENSUS/80% .............NhFGl...tshpsp..........hhpst.h.p.ptthht....s.p CONSENSUS/65% ..........ph.NhFGIp..uuapup.sshhts..phtsst.htshptshhs....stp CONSENSUS/50% ..........ssaNLFGIc..GuacGc.slthts.tpscsss.asoscssapuY...utp ATL_STAAU/1-165 FIGNSYVK----AGQNTLYKMRWNPA--------HPGTHQYATDVDWANINAKIIKGYYD CONSENSUS/80% h.s.shhh.....tpt.hhphhht.t............ttYATs.sautt.hphhtth.. CONSENSUS/65% htspuYlh.....spsshYphhhsst........t..pttYATD.saAtphsphlptht. CONSENSUS/50% ascpuYlt....hspsshYsttasss........uhtsupYATDssYAs+lsslIppap. ATL_STAAU/1-165 KIGEVGKYFD CONSENSUS/80% .....ht.as CONSENSUS/65% .....httac CONSENSUS/50% ....hhstYD
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |