O00468/1-137 HTLRLALEFRALEPQ--------GLLLYNGNA------------RGKDFLALALL----- CONSENSUS/80% ...phththps.t.p........ullhh.tt...............tphh.ltl...... CONSENSUS/65% tphplphph+Tppss........GlLhahss..............tscaltlplh..... CONSENSUS/50% spsslshpF+Tpsss........GlLlasus.............tssDalslpLp..... O00468/1-137 ----------DGRVQLRFDTGS---------GPAVLTSA-------VPVEPGQWHRLELS CONSENSUS/80% ......tutl.h.hphst.........t...h..t.........hsssph+plth. CONSENSUS/65% ......sGplthphshus.........s.hplpsp.......ttlsDGpWHplplp CONSENSUS/50% ......cG+lplphchGu.........ussplpss.......pslsDGpWHsVslp O00468/1-137 RH----------------WRRGTLSVDG---------------------------ETPVL CONSENSUS/80% h.................tpth.l.lc................................. CONSENSUS/65% pp................tpphplplD............................tt.ht CONSENSUS/50% +s................scplpLpVDt...........................sspss O00468/1-137 GESPSG------------------------TDGLNLD--------------------TDL CONSENSUS/80% ...............................t.hph.....................t.l CONSENSUS/65% tpt.tt........................tphlshp....................s.l CONSENSUS/50% spssss........................pssLsls....................ssl O00468/1-137 FVGGVPEDQAAV-------------------------------ALERTFVGAGLRGCIRL CONSENSUS/80% hlGuh...............................................sa.Gshpt CONSENSUS/65% alGGhs.t..........................................ttsFpGClps CONSENSUS/50% alGGhPssht....................................ttssssuFpGClcs O00468/1-137 LDVNNQ CONSENSUS/80% l.hpt. CONSENSUS/65% ltlssp CONSENSUS/50% lplssp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |