LMA1_HUMAN/1-2 QCRQRGLFPAILNLASN--AHISTNATCGEK-------GPEMFCKLVEH----------- CONSENSUS/80% .tt.tthhP.hhNhuhs..t.l.uosTCGt.........sphaC................ CONSENSUS/65% tsp.ptChPshhNhAhs..t.lhAouTCGpp........sppaChhst............ CONSENSUS/50% sspPpsChPsalNuAaG..splpATSTCGpp.......tPE+YCplst............ LMA1_HUMAN/1-2 ------------VPGRPVRNPQCRICDGNS------ANPRERHPISHAIDGTN------N CONSENSUS/80% ...................tttCphCcsp............pHs.t.hhshst......p CONSENSUS/65% ..................ptppCchCDsp..........hhsHssp.lsDhss......s CONSENSUS/50% ...............tstpscsCchCDus........ssccuHPsupLTDtsss..ts.T LMA1_HUMAN/1-2 WWQS-------PSIQNGREYH-WVTITLDLRQVFQVAYVIIKAA-NAPRP-GNWILERS- CONSENSUS/80% hWpS........sh.p......pVslTlsLtptFclsal.lpht..osRP.uhhlhcpo. CONSENSUS/65% WWQS.......psh.ps.p...pVsLTLsLtppFclsYlhlpFs..SPRP.uhhlhc+o. CONSENSUS/50% WWQS.......-shssGhpa..sVoLTLcLGKcF-lTYVhl+Fs..SPRPtShsIlERS. LMA1_HUMAN/1-2 LDGTTFSPWQYYAVSDSECLSRYNITPRRGPPTYRADDEVICTSYYSRLV-PLEHGEIHT CONSENSUS/80% c.GpsatPapaau.p...C.p.ash.sph..tp...cppshChsphpph..s.tsuplhh CONSENSUS/65% DaGpoWpPaQaausp...Cpppautsspsshsp...-p-shCsspaoch..PhpsGclsh CONSENSUS/50% DaGcTWpPaQaYSus...CccpFG+sscsuIs+.tsEs-AlCTo-aScls.PLsuGEIAF LMA1_HUMAN/1-2 SLINGRPSAD--DLSPKLLEFTSARYIRLRLQRIRT----LNADLMTLSHREPKELDPIV CONSENSUS/80% phlps+Psu.t.t.S.hLQcaspATslRl.h.+hps....h.sthht.........t.ts CONSENSUS/65% shlpsRPuupshspS.hLQ-aspATslRlphpRhps....hssclhs.........csps CONSENSUS/50% SlL-GRPSAcsa-sSsVLQ-WVTATsIRlsLsRLcT....LsscLhs........tDspV LMA1_HUMAN/1-2 TRRYYYSIKDISVGG CONSENSUS/80% htpYaYult-ltlsG CONSENSUS/65% hcpYaYulp-lslGG CONSENSUS/50% sc+YaYAIoDluVGG
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |