103690.alr4840_from_386_to_517EISDWDLEAIVNDEIQ----------------------------------------QAP- CONSENSUS/80% ch.stsl..lh.t.h............................................. CONSENSUS/65% -lsst-l.tlhppth............................................. CONSENSUS/50% Els-sDlpsLhpcphh...........................................t 103690.alr4840_from_386_to_517DLFRVELVQVSCGSNARP--------------TATVTLRT-PDGE--------------- CONSENSUS/80% ..hph.thph.ttt....................th.hth..ts................ CONSENSUS/65% thhpl.phpshstpt.................tspsslpl..ssp............... CONSENSUS/50% ptacLpphpltsssp.................sussslplpssGp............... 103690.alr4840_from_386_to_517----ELTDAAI-----GTGPVDAVYKAINR-------VVNVPN--QLIEFS-----VQSV CONSENSUS/80% .........s.......sGPlsAh.pAlpp.......hh......pl.pYp.....h.s. CONSENSUS/65% .....hthtu......GsGPVcAhhpAlpp.......hh...t.hclhcYp.....shsh CONSENSUS/50% .....psspu......GsGPVDAlhcAlc+.......hss.hs.hcLp-Yc.c...llus 103690.alr4840_from_386_to_517T-------------AGIDAI--------------GEVTIRLRYES--------------- CONSENSUS/80% ...............tpsu.................s.l.lp.tt............... CONSENSUS/65% t..............Gs-Ah..............u.spVplp.ts............... CONSENSUS/50% s.............tGoDAp..............utlpVplchss............... 103690.alr4840_from_386_to_517-RVFSGHAANTDIIVASAQAYVNALNRLY CONSENSUS/80% .p.h.shGhstslh.AShpAhlsuhshhh CONSENSUS/65% .phhtuhGhssDllpAShcAhlsulNthh CONSENSUS/50% .+phsGsGlssDIlpASs+AllsAlN+hl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |