28985.Q6CLD3_from_501_to_660DLADDVY---------ALAN-KWIASAQKFTEREQFEKEFSI---------KDISEFSSN CONSENSUS/80% ohh..h..........thtt.tW.t............................htthps. CONSENSUS/65% oLspssh.........pLsp.pWhpst.tt......................chpsassp CONSENSUS/50% SLscssh.........cLup.+Whsuspss.p.......hs..........tDlpsaosp 28985.Q6CLD3_from_501_to_660QIVLLLDTLVQGGMPEKDTFKWSNY--PEASEIFTDIYEDKISK--SQNAE-VIFRNYRL CONSENSUS/80% phhhaLpp.....t..............t.ht.htpha..phtp..stNsE.lthpahpl CONSENSUS/65% QhlhFLsplh.ptp..............ptlpthschY..phsp..spNuE.lth+Whpl CONSENSUS/50% QhlhFL-pLlpppsshs..........ssplppLscsY..pLss..opNuE.l+aRWhcL 28985.Q6CLD3_from_501_to_660QVK----SHITSSYPELAEWLGTVG-------RMKFVRP--------------------- CONSENSUS/80% hlp....st.t..h..h.phltp.G.......+hKhhhP..................... CONSENSUS/65% slc....sphpshhststcaLsp.G.......RMKas+P..................... CONSENSUS/50% sl+....ucacsshspltcaLsppG.......RMKFlRP..................... 28985.Q6CLD3_from_501_to_660-GYRLLNEVD-----RELAIKTFHRFRDSYHPICKSLVKQDL CONSENSUS/80% .lattL.th......pthAhphatthpt.hHs.stthltp.L CONSENSUS/65% .LYctLhtss.....pplAhpsFtpt+sthHshstthlpc.L CONSENSUS/50% .LY+cLtsssp....+sLAlcsFpcs+spYHPlspshVc+DL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |