XLYA_BACSU/1-45 TYVVKQGD--TLTSIAR--AFGVTV------AQLQEWNN--------------------- CONSENSUS/80% hhhVptG-..ol.tlut..phthsh......tplhphN...................... CONSENSUS/65% hapVppGD..oL.pIAp..phshsh......pplhphN...................... CONSENSUS/50% sYsVKpGD..TLtsIAp..caslol......spLtphNt..................... XLYA_BACSU/1-45 IEDPNLIRV--GQVLIVS CONSENSUS/80% ..psp.l....Gp.lhl. CONSENSUS/65% hhssstlhs..Gpplpls CONSENSUS/50% thsssplpl..GQpLpls
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |