367928.BAD_0364_from_148_to_24NPAVTMDRRL---IAYAL------SNA----HYVEFTFAD-------GTQTKIR---TNF CONSENSUS/80% tthhhl.htp...lhhhp......stt....phhhlhh.........tt.h.h.....pl CONSENSUS/65% pphhhlthp-...Ihahp......spt....phlhlhst........tpphhhp...hsL CONSENSUS/50% sclhhlshs-...Ilalc......ups....chlplaTs........scpahhp...toL 367928.BAD_0364_from_148_to_24SDVDRRL--------------------TVFDNFYRTAR------GVLVNFDYVSGI---- CONSENSUS/80% tphtpth.......................t.Fhphp+......shllshphlttl.... CONSENSUS/65% pplpppL.....................ssptFhRsHR......ShlVNhptlpplp... CONSENSUS/50% pcLEccL.....................ssspFlRlHR......SalVNlspIcclcpt. 367928.BAD_0364_from_148_to_24---------------TNAQFVMK--------GGKRI-----PITKTAVTTTCRAYA CONSENSUS/80% ................tt.h.h..........t.........lo+phht.hpthh. CONSENSUS/65% ................psthhlh........tsttp......lSRphhptl+phlt CONSENSUS/50% ...............tsushplp.......hpsssch....sVSRpthcpl+ctLs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |