405532.BCB4264_A3393_from_50_to_352HDRQ-DLGFILRRNTPLKVRQTNPNFKD--------KLTL-----RLLSNDSKNEK--SI CONSENSUS/80% t.h..soGhah..sp.h.l.h..st...........th.h......htpp..t.....t. CONSENSUS/65% sshp.sTGlah.sGpplplphs.sst.t........plpl......luspspsh..t.pt CONSENSUS/50% ssap.sTGlYlssGcplslpls.sssss........slpl.....plGscsssh.tp.ss 405532.BCB4264_A3393_from_50_to_352Q--------VGNEWVTIQGDTSLVP-------FIDTPYGEEHAV---------------- CONSENSUS/80% ..................tph.lp....t....ht..hGG.lhh................ CONSENSUS/65% .........h.p..shh.pphslpt...st..plss.hGGhlal....h..t...ttpst CONSENSUS/50% s........hpR.hshhpppasLss...up.splsssaGGllYl....hssp...sssss 405532.BCB4264_A3393_from_50_to_352-LEYQVGNESATKPLP-IYKQQGSVSQ------------------FFSAWDQFDGEY--- CONSENSUS/80% .hphph...pss..hP.ha...s.tp...................tta.t...p.....h CONSENSUS/65% slplpl...pushthP.hahh.upsst..................tpWpp..hpttssPh CONSENSUS/50% slclsl...sGulpsP.aFch.Gcsop..................p-Wcsp.lcpssuPa 405532.BCB4264_A3393_from_50_to_352---------------------ALLQGESFQLFVPKKDKELVRSLKDFQS------LDELI CONSENSUS/80% .....................spl.spphhhth..ptht...th.p..........tthh CONSENSUS/65% .....................s-ltscphllssstpphp...phts.........spplh CONSENSUS/50% .....................uELco-plllTlPscsl+...phsc.........sscLl 405532.BCB4264_A3393_from_50_to_352AY---YEDIFVM-YDSIIGLDGSTFENKKSQN--------------RYFLKADISG---- CONSENSUS/80% th...hpphht....ph.uh........t...................thh.thth.... CONSENSUS/65% ph...acphhph..tplsuhst.shtt.p...................chltchph.... CONSENSUS/50% ch...aDclhcs.hscluGlst.stspsp..................hRhVsDlpl.... 405532.BCB4264_A3393_from_50_to_352AGG---AYYGTNWTAN----------STDSTKMWLDKL--------------SWGTLHEI CONSENSUS/80% ..t...hhss.h.hhh..........t.htthhp...h...............WG.hHEh CONSENSUS/65% stu..hhauu.h.lhh..........sshsthhshppht.ts...........WG.hHEl CONSENSUS/50% ssG..hMauusYslssth........suhssllshpshpssu..........sWGshHEl 405532.BCB4264_A3393_from_50_to_352AHGYQ-------------AGFDNQG-IFTGEVSNNLFGVQY----QYSK------YGKKA CONSENSUS/80% GHt.p.............t.h.h....thsEsosNlhshhh.....p.h........... CONSENSUS/65% GHshQp............tshths...thsEsosNlauhhs....ppph........... CONSENSUS/50% GHspQp............usapas...sssElTsNlaSlal....pcph.......t... 405532.BCB4264_A3393_from_50_to_352DQVGWLFNFG-----KKEQVERNLYNALMKENK---NYDDLDL----------------- CONSENSUS/80% .....tht.......tt...........htt.t.....p.ht.................. CONSENSUS/65% .ttt.thp.t.....tp.tphtth....htpsp....hpsas.................. CONSENSUS/50% tpspsslsss.....sctscstsa....lssss...shcsast................. 405532.BCB4264_A3393_from_50_to_352------RQKLI--LLTMAKQKAG CONSENSUS/80% .........h...hhhph..hht CONSENSUS/65% ........tLh..hahQLp.haG CONSENSUS/50% ......hstLs..hahQLphtaG
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |